Pleuronectes platessa (European plaice): 128458174
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Entry
128458174 CDS
T09923
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03013
Nucleocytoplasmic transport
pplt03015
mRNA surveillance pathway
pplt03040
Spliceosome
pplt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128458174 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
128458174 (alyref)
03015 mRNA surveillance pathway
128458174 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128458174 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128458174 (alyref)
03041 Spliceosome [BR:
pplt03041
]
128458174 (alyref)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128458174 (alyref)
TREX complex
128458174 (alyref)
Spliceosome [BR:
pplt03041
]
Complex C
Other components
EJC/TREX
128458174 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128458174 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
128458174
NCBI-ProteinID:
XP_053298852
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All DBs
Position
16:complement(19657099..19660141)
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AA seq
284 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGGRGGGGRGRGRGGSGGGRGAGGAGRVGMRGGGGGGDGG
FGGRGGGSGPMRNRQNPSRARGRTTPYNRLKSLPDKWQHDMFDNGFSGFNGAAGGGGGGG
VETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALK
AMKQYNGIPLDGRPMNIQLVTSQIDTQRRPVQGLNRGGGGGMNRNRGGSFGGMQRGRGGR
GAGGPGGPRGRGRGGRGGNPKAAAMSAEELDAQLDAYNARMDTT
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagatggatatgtctctagacgacattatcaagcagaacaggcagcaaaga
ggcggaggccgcggcggcggcggaagaggccgaggccgcggaggctccggcggcggccga
ggagcaggcggcgccgggcgcgttggaatgagaggaggcggcggtggcggcgacggagga
tttggaggccgaggcggtggatccggccccatgaggaaccgacagaacccgagccgtgct
agaggcagaacaacgccttacaacaggctaaaatcgcttccagataagtggcagcacgac
atgttcgacaacggcttcagtggcttcaatggtgctgctggaggtggcggaggaggaggc
gtggaaactggagggaagctcctcgtctccaatctcgactttggcgtctcagatgcagac
attcaggaactctttgctgaatttggaactctaaagaaggcggcggttcattatgaccga
tcagggagaagtctgggaactgcagatgtccactttgaaagaagagcagacgcactcaag
gccatgaagcagtacaacggcatcccactcgatgggcggcccatgaacatccaactcgtc
acatcacagatcgacacacagagacgacctgtacagggtctgaacagaggtggcggcgga
ggcatgaacagaaatcgagggggcagcttcggcggcatgcagagaggtcgaggaggccgt
ggtgccggtggtccagggggtcccagaggacggggtcgaggaggacgtggcggaaaccct
aaggcggcggcgatgtcggcagaggaactcgacgcccaattagacgcctacaatgccagg
atggacacgacataa
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