Pleuronectes platessa (European plaice): 128458258
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Entry
128458258 CDS
T09923
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128458258 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pplt04031
]
128458258 (rab40c)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
128458258 (rab40c)
GTP-binding proteins [BR:
pplt04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
128458258 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128458258
NCBI-ProteinID:
XP_053299006
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Position
16:complement(5641597..5661250)
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AA seq
279 aa
AA seq
DB search
MGSQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANPAGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccagggcagcccggtgaaaagctacgactaccttcttaagttcctcctggtt
ggagacagcgatgttggaaaaggagagatcctggacagcctgcaagacggatctgccgag
tccccatatgcttatagcagtggtatcgactataaaaccaccaccattctcctggatggg
agaagagtgaagctcgagctctgggacacctcaggacaagggaggttctgcaccattttt
cgctcctattcccgcggggctcaggggatcctgctggtgtatgacattaccaaccggtgg
tcatttgatggcatcgacaggtggatcagagagattgatgagcatgcaccaggcgtgcct
cgaatcctcgtaggcaaccggctacatctggccttcaaacggcaagttcccactgagcag
gccagggcatatgccgagaagaacggcatgacgttcttcgaggtgagccctctgtgcaac
ttcaacgtcatcgaatccttcacagagctatctcgtatcgtcctgatgaggcatggcatg
gagaagttctggaggcccaacagagtcttcagcctccaggacctttgctgccgagccatc
gtgtcatgcactccagtccacctcatcgacaagctcccgctgcctgttgccattaagtcc
cacctcaaatccttctccatggccaatggcatgaacgccgtcatgatgcatggacgctct
tactctctggccaacccagctggcggctctaaaggcaacagcctgaagcgctccaagtcc
atccgtccaccgcagagccctccgcagaactgcacccgcaacaactgtaaaatctcctaa
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