Pleuronectes platessa (European plaice): 128458273
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Entry
128458273 CDS
T09923
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03440
Homologous recombination
pplt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128458273 (top3a)
03460 Fanconi anemia pathway
128458273 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pplt03032
]
128458273 (top3a)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128458273 (top3a)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
128458273 (top3a)
DNA replication proteins [BR:
pplt03032
]
Eukaryotic type
DNA Topoisomerases
128458273 (top3a)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
128458273 (top3a)
FA (Fanconi anemia) pathway
128458273 (top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
128458273
NCBI-ProteinID:
XP_053299028
LinkDB
All DBs
Position
16:21598859..21609385
Genome browser
AA seq
1052 aa
AA seq
DB search
MLIANLPGRSLLRPGLQRLGVHWRRLCAEQSGRSPDTRLQEDMNRSRGQIKRVLCVAEKN
DAAKGIAEIMSGGGARRREGMSKFNKIYEYEYHLFGQNVSVSMTSVSGHLLGLEFKAAFK
KWHSCNPQLLFDAEVEKYCPDNMIQIKRTLEKEVRQCQALVIWTDCDREGENIGFEVIDV
CKAVKHNLQVFRAKFSEITPNSIRRACETLTAPDANVSDAVDVRQELDLRIGASFTRFQT
LRLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEDTVEF
SWKRNRLFHHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVEMEKLASRKLRIN
AKETMKIAEKLYTQGFISYPRTETNIFPATLDLSPLVGLQTQSQAWGTFAQRVLDQPGGP
NPRQGKKSDQAHPPIHPTKFTHTLQGNEGRIYEFIVRHFLACVSQDALGQETVVDIDIAQ
ETFSTSGLMIIARNYLDVYPFDRWSAKVIPVYENGSQFQPSAIEMVDGQTSPPQLLTEAD
LISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKP
NLRAELEADLKLVSEGRKDKRGVLLQHIQKYKTVFIESVRKAKKLDEALSLYLGAAQEIP
EEEQQDMEIPLPVRKCPHCSQDMVLKKKREGNGKYLSCVGFPACKTAVWFPDTVLEVSRD
DSICPTCQPRPVHMLRFKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRAGGGGGD
GGGVGGAGRRGGGGGGGGGGRGDPRPPAPRPPRPDPPRPPRSNPRPSLPPVPSWTPQPRS
PPGGGGGGDPNSDAIVCNCGQDALLLTVRKDGPNQGRQFYKCNAGSCNFFLWSDEPSQPE
ASQSRGPPRPLPAPHTSQPPRPSLGFKNTFGGGQGQEGGSGGQVGQTMCNCNETAVTRTV
QKDGPNKGRMFHTCGKPREQQCGFFQWADENAPPPGNFGGGFNGGGDREDGGGRGRKKMG
AANPNKPPAAKKPRTCGICHVPGHTRVTCPQR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgctcatagcgaacctaccgggaagatccttgcttcgaccgggactgcagcggctcggg
gtccactggaggcgtctctgtgcggagcagagtggccggagtccggacacacgtctgcag
gaagacatgaaccggagccggggtcagatcaagcgggtcctctgcgtggccgagaagaac
gatgcagccaagggcatcgcagagatcatgtccggcggcggagcccggaggagggaagga
atgtcaaagtttaataaaatctatgagtatgaatatcatctctttggtcagaatgtctcg
gtatcaatgacatcagtatctggtcatttactgggtctggagtttaaagcagcgttcaag
aaatggcacagttgtaatccccagctgttatttgatgctgaggtagagaagtactgtccg
gataacatgatacaaatcaagcggactctggagaaagaggtgaggcagtgccaggccttg
gtcatctggactgattgtgacagagagggagaaaatattggctttgaagtcatagacgtc
tgtaaagcagttaaacacaatttgcaagtctttcgggcaaagttttctgagatcaccccc
aactccattcggagagcttgtgaaactctgacagcgccggatgctaacgtcagtgatgct
gttgatgtgcgtcaggagctcgacctgcggataggtgcatccttcactcgattccagacc
cttcgccttcagaagatctttccagagtcgctggccaatcagctgatctcatacggcagc
tgtcagtttcccactctgggctttgtggtggagcgtttcaaagccatccaggcgtttata
ccggagaccttctacaaaatcaaagtgctccatgaagttgaggaggacactgtcgagttc
agctggaaaagaaaccgtctcttccaccacacagcttgcctggtgctttaccagatctgc
atggaggatcccatagcaacagtcacctcagtaaccagcaaacccaagagcaagtggaga
ccgctgcctctggacactgtggaaatggagaaactggcgtctcggaagctgaggataaac
gccaaggagaccatgaaaatcgcagaaaaactctatactcaagggtttatcagctacccc
cgcactgagacaaacattttccctgcaaccctggatctaagtcccctggtggggctgcag
acacagagccaggcctgggggacgttcgcccagcgggtgctcgaccagcccgggggtccc
aacccgcgacagggcaagaaatctgaccaagcccatccccccatacaccccaccaagttc
actcataccctgcagggcaatgaaggacgtatttacgagttcattgtccgtcacttcctt
gcctgcgtgtcccaagatgctctggggcaggagacggtggtggacatagacatagcccag
gagacgttctccacctcgggactcatgatcattgcaaggaactacctggatgtttacccg
tttgacaggtggagtgccaaggtgattccagtgtacgagaacggctcccagttccagccc
tctgcgattgagatggtggacggacagacgagtcctccgcagctgctcactgaagccgac
ctcatatcactgatggagaagcacggcatcggcacagacgcgacccatgcagatcacatt
gagacgatcaagagccgcatgtacgtgggcttgacagctgaccagaggtttctccctgga
gagctcggcatggggctggtggagggatacaactccatgggctatgagatgtctaaaccc
aacctgcgtgctgagctggaggcagatctcaagctggtgtccgagggcaggaaggacaaa
cggggggtgctgctgcaacacatccagaaatacaaaaccgtcttcattgagtctgtcagg
aaggcaaagaagttagatgaagccctgtcgctgtatctgggtgcagctcaggagatccct
gaagaagagcagcaggacatggagatcccgctccctgtcaggaaatgtcctcactgtagt
caggacatggtgctgaaaaagaagagggagggaaacggtaagtacctgtcctgcgtgggt
ttccctgcctgtaagacagcagtgtggttccctgacacagtactggaggtcagcagagac
gacagcatttgtcccacctgtcagccacgccccgttcacatgttgaggtttaagttccgc
aggggcagcctccctcccatgatgcctttagaatttgttggctgcatcgggggatgtgat
gagacgctcagagaggtgctggacttgaagtacctcagagcagggggaggaggaggagat
ggtggaggagtgggaggtgctgggagacgaggaggtggaggaggtggaggaggtggagga
agaggtgaccctcggccaccagctccacggcctccaagaccagatccacccagacccccc
cgttccaatccccgaccttcccttcctcctgtcccctcctggacccctcagcctcgctct
ccaccaggagggggcggtggtggagaccccaacagcgacgccattgtgtgcaactgcggt
caggacgcacttctcctcactgtgcgtaaagacggccccaaccaagggcgtcagttctac
aagtgcaacgctgggagctgcaacttcttcctgtggtcagatgaaccaagtcagccggag
gcatcgcagagtcgagggcccccccgacccctgcccgcaccacacacctcccagcctccg
aggccctcgctgggcttcaaaaacacgtttggaggaggccaagggcaggaagggggatct
ggaggacaagtgggacagaccatgtgcaactgcaatgagacggcggtgacgcgtacggtg
cagaaggacggtcccaacaagggccggatgttccacacctgtgggaaacctagagagcaa
cagtgtggcttcttccaatgggcggatgagaacgcacctccaccaggtaactttggtggt
ggatttaatggtggaggagaccgtgaagatggagggggaagagggaggaagaaaatggga
gcggccaaccccaacaaacctcccgctgctaagaaaccccggacctgcggcatctgccac
gtgccgggacacacccgggtcacctgccctcagcggtga
DBGET
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