Pleuronectes platessa (European plaice): 128458321
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Entry
128458321 CDS
T09923
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03030
DNA replication
pplt03410
Base excision repair
pplt03420
Nucleotide excision repair
pplt03430
Mismatch repair
pplt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128458321 (pold1)
03410 Base excision repair
128458321 (pold1)
03420 Nucleotide excision repair
128458321 (pold1)
03430 Mismatch repair
128458321 (pold1)
03440 Homologous recombination
128458321 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pplt03032
]
128458321 (pold1)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128458321 (pold1)
Enzymes [BR:
pplt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128458321 (pold1)
DNA replication proteins [BR:
pplt03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
128458321 (pold1)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
128458321 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
128458321 (pold1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
divDNApol
Motif
Other DBs
NCBI-GeneID:
128458321
NCBI-ProteinID:
XP_053299082
LinkDB
All DBs
Position
16:complement(19341046..19350803)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFKRRNGATFRGGAPQAKRGKPAGEWEDSPSQFEEELSMFDETDMDSEAMEGQAGHDVI
PVGELFSANLNPRWPRPAAPPLEPSSDTLVFQQIDLDYYLGNAVAGMPGQSQGTVPIIRM
FGVTDSGNSVCCHIHGFAPYFYVPAPNGFTSDNLVEFKRELNSAVLKDMRSNKDNISITV
LAVDITQKESMYGYHGQRSISFLRITMAMPRLIAPAKRLLEQGIKFGPFQHQSYKAYEAN
IDFEIRFMVDCAVVGCCWIELPKGKFRVREEKALGETNTQYPSKVTLCQYEVDVGWTDFI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGDSEPFIRTVFT
LQSCASIVGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLINRATALKVN
LFPYLGRVRGIKSVLRDLNFQSKQMGRRENKITNIEGRVQFDLLQVLLRDYKLRSYTLNA
VSYHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVIKVEGGEDYTGATVIEPEKGYYSV
PITTLDFSSLYPSIMMAHNLCYTTLLQKGSSEKLGLSAEDFIKTPTGDLFVRSSVRKGLL
PEILENLLSARKRAKTELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTISSGYPGDAKVIYGDTDSVMVKLGVSTVKEAMEIGR
EAAAWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHEKMDCKGIETVRRDN
CPLVANLIGTCLQRILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAA
KQAHVELAERMRKRDAGSAPNMGDRVPYVIIKAAKGAAAYMKSEDPIYVLENTIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSKVGGLMAFATKRNTCIGCK
AVLKADTAVCDFCKKKESELYQKEIFHMNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaagacgcaacggtgccaccttcaggggcggtgcacctcaggccaaacgg
ggtaaacctgccggcgagtgggaggacagtccgtcgcagttcgaagaggaactgtccatg
ttcgatgaaacagatatggattcagaggcgatggagggacaggcaggtcatgacgttatt
cccgtaggtgaactattctcggcaaacctcaaccctcgctggccacggcctgctgctccc
ccgctggaaccatcatctgatactttggtgtttcagcagattgatctcgactattattta
gggaacgcagtggctggtatgcccggtcagtcgcagggaacagttcccatcatccgcatg
tttggggtgacagacagcggcaacagtgtttgttgccacattcacggctttgcgccttac
ttctatgttcctgcaccaaatggttttacgtctgataacttggttgaatttaaaagagaa
ctgaactctgctgtgctgaaggacatgcgctccaacaaggacaacatctccatcacagtg
ttggctgtggacatcacccaaaaagagagcatgtatggataccacggacaacgcagtatc
agtttcttgcggataacaatggcgatgcctcgcctcattgccccggcgaagagacttctg
gagcagggcataaagttcggacctttccaacaccagagttacaaggcctacgaggccaat
atagattttgagatcaggtttatggtggattgcgctgtggtgggatgttgctggattgaa
cttcccaaaggcaagttcagagtgcgtgaggagaaggccttgggggaaacgaatactcag
tacccaagcaaggtgaccttgtgtcagtatgaggtggacgtgggatggacagatttcata
agtcacccagcggagggagactggcagaggatcgcaccactccgggtcctgagctttgac
attgagtgtgcaggaagaaaaggaatcttcccagaggctgataaagaccctgtgatccag
atagcgtctatggtccagcgtcagggtgactcggagcccttcattcgcactgtgttcacc
ctccagtcctgcgccagcattgtaggctctcagatattgtgcttcacacaggagaaacag
ctgctgcagagctgggcggagtttttgagaacagtggatccagacatcatcactggatac
aacattcaaaactttgactttccctacctgatcaacagagccactgctctaaaggtgaat
ctgtttccctacttgggccgagtgagaggaatcaagtcagtcttgcgagacctgaacttc
cagagcaagcagatgggacgcagagagaacaagatcactaacatagagggacgtgtccag
ttcgatttgctgcaggtgctcctgagggattataaactgcgctcatacacactaaacgct
gtgagttaccacttcctgcaagaacagaaggaggatgtacagcactccatcatcactgat
ctgcagaacggcaacgaacagactcgcagacgtttggctgtctactgcctgaaggacgcc
tatctcccgctgcgcctgctgcagaagctgatgtgtgtgattaactacatggagatggcc
agagtgacaggtgtgcctctcacatacctgctgtcaagaggacagcagatcaaggtcgtc
tctcagctgctgcgacaggccatgaagcaggacctggtcatgcctgtcataaaggtagaa
ggaggagaagactacactggagcaactgtcatcgagccagagaaagggtattacagcgtt
cccattaccaccctggacttctcctccttgtatccctccatcatgatggctcacaatctg
tgctacaccaccctgctgcagaagggctcatcagagaaactaggcctgtcagctgaggac
ttcatcaagactccgactggtgacctgtttgtgaggagctcagtgaggaaaggacttcta
cctgaaatcctggagaaccttctgtcggccagaaagagggccaaaacagagctgaagaag
gaaactgaccctttcaagaagcaggtgctggacggacgtcagctggctctcaaaatcagt
gctaactctgtgtatggcttcactggggcccaggtgggcaagctgccctgtctggagatc
tctcagagcgtcacaggttttgggaggcagatgatcgagcaaaccaaacagctggtggag
tccaagtacaccatctccagtgggtacccaggtgatgccaaggtcatctatggcgacaca
gactctgtcatggttaaactcggggtttcgacagtgaaggaggccatggaaatcgggaga
gaggcagcggcgtgggtgtcgtcccatttcacaccaccaatcaaactggagtttgagaag
gtgtactacccgtacctgctgatcaacaagaagcgatatgccggcctgtatttctcctcc
agtgcagacacacatgaaaagatggactgtaaaggcattgagaccgtccgcagagacaac
tgccctctggtggcgaacctcatcggcacctgtctgcagagaatcctcattgacagggat
cctcagggtgcagtcgctcatgccaaagaggtgatctcagacctgctgtgcaaccgcatc
gacatcagccagctggtcatcactaaggagctgacgcgcaccgcccaggagtacgctgcc
aaacaggcacacgtggagctggcagagaggatgaggaaaagagatgccggcagtgctccc
aacatgggagaccgagttccatacgtcatcatcaaggcggcaaagggagcagcagcttac
atgaagtcagaggatccaatctacgtgctggagaacaccattcccatcgacacacaatac
tacctggaacagcagctgtccaagcccctgctgaggatatttgagcccatcctgggagag
agcaaggcggagagcgtcctgctcaagggcgaccacacacgctgcaagaccgtgttgacc
tcgaaggtcgggggactcatggcgtttgctacgaagaggaacacctgcatcggctgcaag
gctgtgctcaaggcggacacggctgtgtgtgatttctgtaagaagaaggagtctgaactt
taccagaaggagatctttcacatgaacacactggaggaacgtttctctcgcctgtggact
caatgtcagaggtgtcaaggttccctgcatgaggatgtgctctgtaccagccgggattgt
cccatcttctacatgaggaagaaggttcagaaagatttggatgaccagagcaagctagtg
tctcgtttcggatggtga
DBGET
integrated database retrieval system
