Pleuronectes platessa (European plaice): 128458435
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Entry
128458435 CDS
T09923
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt00260
Glycine, serine and threonine metabolism
pplt00630
Glyoxylate and dicarboxylate metabolism
pplt00670
One carbon pool by folate
pplt01100
Metabolic pathways
pplt01200
Carbon metabolism
pplt01230
Biosynthesis of amino acids
pplt01240
Biosynthesis of cofactors
pplt04981
Folate transport and metabolism
Module
pplt_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128458435 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128458435 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128458435 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128458435 (shmt1)
Enzymes [BR:
pplt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128458435 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
128458435
NCBI-ProteinID:
XP_053299238
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Position
16:complement(21577785..21583120)
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AA seq
482 aa
AA seq
DB search
MSATNGHGVSKETWESHNKMMLEPLGINDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDSEKWGVNVQPYSGS
PANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENARLFHPRIIIAGTSCYSRNLDYARLRQIANENGAYLMADMAHISGLVAAGVV
PSPFEHSDIVTSTTHKTLRGCRSGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFRAYQEQVLVNCKALSSALIDYGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGMEQDDFKKVA
QFIHQGVELTLEVQRSLDPKAPLKEFIKALGQEEKFQQRVAEIKAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaacaaacggccacggtgtgagcaaggaaacatgggagtcgcacaacaagatg
atgctggagcctctgggcatcaacgactcagaggttttctccatcataaaaaaagagaag
caccggcagacgtacggtctggagctgatagcgtctgagaactttgctagcagagctgtg
ctcgaggctctgggttcctgcatgaacaacaagtactctgagggataccccggacagagg
tattatggtggcacagagcatgttgatgaactggagagactttgtcagaagagggctctg
gaggcatatggtctggactcagagaaatggggcgtcaacgtgcagccatactcaggttcg
cctgctaacttcgcggtctacacggccatcgtggagccacacggcagaatcatgggactg
gacctccctgatggaggtcacctgacccacggcttcatgactgaaaagaaaaaaatctca
gcaacgtccatcttcttcgagtccatgccatacaaggtgaatccagagaccggctacatc
gactatgacaggctgcaagaaaacgcacgtttgttccatcccagaatcatcattgcagga
acaagctgttattcccgcaacctcgactacgcccgtttgaggcagatcgccaacgagaac
ggtgcgtacctgatggcagacatggctcacatcagcggtttggtggctgccggcgtggtg
ccctccccctttgagcactcggacattgttacatcgacaacgcacaagacgctgcgtggc
tgccgctctggacttatcttctacaggaaaggggtgcggagtgtcgatgccaaggggaag
gagactttgtacaacttggagtctttgattaatcaggccgtgtttcctgggctgcaggga
ggaccacacaaccacgctattgcaggtgttgctgtagctctcaaacaagccatgacccca
gagttcagggcctaccaggagcaggttcttgttaactgcaaagctctgtccagtgctctt
attgactacggctacaagatcgtcactggtggctctgacaaccacctgatcctattggac
ctgcgcagcaagggaactgatggaggacgagctgagaaggttctggaagcctgtgccatc
gcttgcaataagaacacctgtccaggggataaaagtgcgctgcgcccgagtggcctgagg
tttggctccccagctctgacctccagaggcatggagcaggatgacttcaagaaggtggcc
cagttcatccaccaaggcgttgagctgaccttggaggtgcagagaagcctggatcccaag
gcccctcttaaggagttcatcaaggccttgggacaggaagagaagttccagcagcgggtg
gcagaaatcaaggctgaggtggaggctttcgctggtcagttccccatgcccggcctccct
gagctgtag
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