Pleuronectes platessa (European plaice): 128458436
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Entry
128458436 CDS
T09923
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128458436 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128458436 (cpsf4)
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128458436 (cpsf4)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128458436 (cpsf4)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128458436 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
128458436
NCBI-ProteinID:
XP_053299241
LinkDB
All DBs
Position
16:complement(21573879..21577092)
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AA seq
266 aa
AA seq
DB search
MQDLLANAEHIKFDLELAMEQQLGAQPLPFPGMDKSGSAVCEYFMRAACVKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICMNYLVGFCPEGKSCKFMHPRFELPMGASEQPP
LPLQSQNQAKPVPTLGRSSLSLIQLTHSSPSQRPQNNHHMGGFQQNTMIGNRGPRPLDQV
TCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacttactggccaacgcggaacacatcaagttcgacctggagctcgcgatggag
cagcagctgggggcgcagccgctgcccttccccggcatggacaagtccggatccgctgtg
tgcgagtacttcatgcgagcggcttgtgtgaaaggcgggatgtgtcctttccgtcacatc
agtggagagaagacggtggtgtgtaagcactggctccgaggcctgtgtaagaagggagac
cagtgcgagtttctccatgaatacgacatgaccaagatgcctgaatgctacttctactcc
aaatttggcgagtgcagcaacaaggaatgtccgttcctgcacatcgatccagagtccaag
atcaaggactgtccctggtacgaccggggcttctgcaaacacggtcccgactgcagacac
agacacacaagaagagtgatctgtatgaactacctggtcggtttctgtccagaaggaaaa
tcctgtaaatttatgcaccctcgttttgagctgcctatgggagcctctgaacagcctccg
ctaccattacaatcccagaaccaagcaaagcctgtgcctaccctcggccgctcgtcgctc
tctctcatccagttgacccactccagtccaagccagcggccgcagaacaaccatcacatg
ggcggtttccagcaaaataccatgattggcaacagagggcctcgtccactggaccaggtc
acctgctacaagtgtggagagaagggccactatgccaacaaatgcactaaaggccacctc
gccttcctcagtggacagtga
DBGET
integrated database retrieval system
