Pleuronectes platessa (European plaice): 128458652
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Entry
128458652 CDS
T09923
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pplt
Pleuronectes platessa (European plaice)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
128458652
NCBI-ProteinID:
XP_053299538
LinkDB
All DBs
Position
16:complement(8269406..8327081)
Genome browser
AA seq
2465 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLVNNRRLYPGAEDEEEEEEEEEEEMEEDERDEDGEEEENGELE
GEEEEDEEEMVEEVRRGGLSRGGRSEGHRQTGKLAARPGGDRQVRPGNPGHTANPYSSNP
GPTHQQPANQIQQQQQRRLKERSTSSVPSEDTHIAMMVFRIGIPDIKQTKCLRFNPDATV
WKAKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLKEYPQSFEKGVPYLEFRY
KTRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTTAVDKMVKFLDKGLDPNFQDGDTGETP
LSLAVQCEPGGGESIRVLAEGGAHIDFRAKDGLTPLHKAVRGHRHTALLVLLSLGASPDY
KDRRGLTPLYHTVLTGGDTSCCETLLYHHTKLGIRDENGWDETHQACQHGNSQHLEHLLF
YGADSSSQNASGNTALHICALYNKESCARILLYRGANKDTKNSSGQTPFQVAVMSGHFEL
GEIIKNHRDTDVVPFVESPKYAPQRRESAHKLTIPHPHPFLRANSDSSMNLPDWMAGPNT
PVTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGPAPASTPTQT
AGQRRRLYSAVPGRVFVATRAHSAQGEREISFSKGDRVKVLSVGEGGYWEGTVRGRTGWF
PSDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKSVLLQKKDSE
GFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVK
VGHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIALRSKSMTSE
LEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEAPGTRGQ
GPKRDRGRSFYGNEQNYGDQSGMGMMSSGLGLGYERGQYASGHGPPHGIIRQKSIGVAED
ERKFLHPPAMKFARSLSVPGPDDIPPPPTTAPPDPPFSSAPPLGWRAKSSQQPSVSVSQS
TSTSAHYQPFTQSAHFTHSGRERAGAPPTGPIGGAGDHTTSYSHAAAHTVQSRTASRKVA
YTGEPVGAGIGAGGGAKAGGLRRGYNSAVPPSSIATVMPQQQQTTQSQPQRVDRSAAGAG
GPKGGARRGKGPLMKQSKVEDLRAAQGTLGAKGSLEKSSIPIPTIIVKAPSTSSSGRSSQ
GSSVEADAPAPGETDESKTPHGPPPSTPAPQPPAPPSIPAPPPPTLPSIRAQENLDFTSQ
FGAAIVGAARRDRERFHEARRKSASLFMSVEDDVSLGGVSDGVGARTQVSQQQLSTQAES
SSTRLRPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSSALDYQPKSVPTDLYTPAGRQ
SAPSATTTFIHPLTGKALDPTSPLGLALAARERALRDDSRYRRGTDHHFSRQMSSVVYPS
SAVTSQPVSSVAQSSSTSYLVTSSSLAATTPTVGRPPSPRILRGGGSMWGEEGGGGERER
EGGGAREGLRVRFSEDKTVHTHHYQSPPYQPTYKERERERSRERDREQSRERERDKEREG
YMRRAEQAESSAQQGSQSQQPQRPSFLRMESQSDAYILSLTPPSPPHTSSQQTANTTGST
GTGLMVLPPPAPSVDADDGFGYADPLPPPLEFANSFDRGGGGMSAYTKHGMHPNSLTSRR
QQVPPPPPPPPPPPPPPAPQKEAFASGFPAHTPLPSPQAGDSTTSSLTSYDSEVANLTQS
AHSPSQTSPNPLPPSSPSTLQPTSTAGPPPPPSISPPLPPGSYHRPFSMSHPHHLYNSTH
APGRSSPTPPLHTIAPPPSYRGHPVPSSTAATSAPLRGTASHATTASCAAITTAAATTTS
TSTQLYQERTHPTSSATITGSRRTGEHHRPPPATKKGESQETVVDSGIEELDSRSSSDHH
LDTILSLSGAGVRGDRLDRGERGVGGRLGGGGAGESERGGDFLESYMSYLDGQTFEMQNA
TAVTSTYPKANRFREGGRVGDLHRQTSTVPASFHSHRRREEQEDDDVEEGMSEDERGPDG
YRVRDMQTMGRPSSPYFDRPRTPEMKPLWGEGQLTRDGSSQSGTLLEGKRIYPPASSMKP
SIINELSSKLQHRTRDSWSSQRALSRHRSRNRFSEDSASALSPPSARSQSPSPISMSQPS
LSPSPSPTATSQYHNWGRSPSPQPPAACQPPAASQPPRSHSPLSPTSYSPYPTSPKHRPV
YRTKALEFQFIPSRESRKAESHILQRRRAPSPLISPSERPKVGPPRPSSLPLLPTTPLYS
AIYDLRGSITPPSPGNPLGDPYFSPSPPLFAPSGAPPPPNSNLLVSRSLSPTHFLSGASS
PPLHPLPPPTCLSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEI
DGTHLPSLTKDDFLDLGVTRVGHRMNIERALRTIMDRLSSSPFPISVLSPREGLTERRRD
DGSRS
NT seq
7398 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattcagccccctgtccagcgacgaggagcaacaaaggatgctggtaaac
aatcgacgtctctatccaggggcagaggacgaggaagaggaggaggaagaagaggaggag
gaaatggaagaggatgagcgcgatgaggacggggaggaggaggagaatggcgagctggag
ggggaggaggaagaggacgaggaggagatggtggaggaggtcaggcggggaggcctgtcg
agggggggcagaagtgaaggacacaggcagacagggaaactggctgcacggcccggtggg
gacagacaggtccggccagggaaccctgggcacaccgctaacccctactcatctaaccca
ggacccacacaccaacagccagccaatcagatacagcagcagcagcagaggaggctgaag
gagcgcagcaccagctcggtgccatctgaggacacccacatcgccatgatggtgtttcgc
attgggatcccagacattaagcaaacgaaatgtttgcggttcaacccagatgccacggtg
tggaaggcaaagcagcaggtgctgtgctccctcaccgagtcgttgcgggacgtcctgaac
tacggcctgttccaaccggccaccgacggccatgacgccaagttcttggaggaggagagg
ctgctcaaagagtacccacagtcctttgagaaaggggtgccatatttggagtttcgatac
aagacccgggtgtacaaacagaccaatctggatgagaagcagctggccaagctgcacact
aaggccagcctgaaaaagttcatggattatatccaaaccaccgctgtggacaagatggtc
aagttcttagacaagggcctcgaccccaacttccaggacggggacaccggcgagactcct
ctgtccctggctgtgcagtgtgagccaggtggaggtgagtccatccgcgtcctcgccgag
ggaggggctcatattgacttccgtgccaaagatggactcacaccgctacacaaggctgtt
cgaggccaccgccatacagccctgctggtcctcctgtctctgggagcatctccggactat
aaggaccgacgagggctgacgccgctctaccacactgtgctgacagggggcgacacctcc
tgctgcgaaacactgctttaccaccacaccaagctgggcatcagggatgagaacggctgg
gacgagacacaccaggcctgtcagcatggcaactcgcagcatttggagcacctcctcttc
tatggggccgattcctcctcccagaatgcctctggaaacactgccttgcacatttgtgct
ttatacaacaaggaaagctgtgcacgaattctgctttaccggggagcaaataaagacacc
aagaacagcagtgggcagaccccgtttcaggtggctgtcatgtccggccattttgagctg
ggagaaataattaaaaaccaccgggatacagatgtggttccctttgtggagtctccaaag
tacgccccccagaggcgagagagcgcccacaagctgacgataccccaccctcatcccttc
ctgcgggccaacagcgacagcagcatgaacctgccggactggatggcagggcccaacact
ccggtgaccaacatcgtctccgtgcagggctataaacatactggtaccctgcggagctcc
agcagtcccagaggagcgaggacacgttccccgtcaagagggaggatcggtgacaaggag
gaccggagcaggcagagccggaggcaggggcctgctcctgccagcacccccacacagaca
gcagggcagcgccgacgcctgtacagcgccgtcccaggacgagtctttgtcgccactcga
gcgcactctgcacagggagagcgagaaatcagcttcagtaagggggacagggtcaaagtg
ttgagtgttggcgagggtggttactgggaggggacggtcagaggtcgcacaggctggttc
ccctccgactgtgtggaggaagtgatgcttcggagccaagacaaccgatcagagagccgt
ggagaaagagccaaacggttgttccgtcattacacggtgggatcctacgacagctttgac
gctcccagtgactacataatcaaggaaaagtcggtgcttctgcagaaaaaagacagcgag
ggcttcggctttgtgctgagaggagccaaagctcagactcctatcgaggagttcactcca
accccagccttccccgccctgcagtacctggagtcggtggacgagggaggagtggcctgg
agagctggtctgaggatgggggatttcctgatcgaggtcaatggtcagaatgtggttaaa
gttggacaccggcaggtcgtcaacatgatccggcaaggtggcaacagcctcatggtcaag
gttgtcatggtaacccgcaacccagacatggaggagggttcgaggaagaaaattcctcag
cagagtaagaggctcagcactcccgccatcgccctacgatccaaatccatgacctccgag
ctggaggagatggtggagcgagctgctaccccttggaaaaaaaaatcagaattcgaatcc
tcccaagttacagagaagaagaggacagtctatcagatggctttgaataaactagatgaa
attcttgcagcagctcagcagacaattagcaccaatgaagcgcctgggacacggggacag
gggccaaaaagagacagagggcgaagcttctatggcaacgagcaaaattacggggaccag
tccgggatggggatgatgtcatcaggcctgggcctcggctacgaacgtggacagtatgcc
tcaggtcacggcccaccgcacggtattatacggcagaaatccatcggggtggctgaggac
gagaggaagttcctgcatcctccggccatgaagtttgcacgaagtctttcggtgcctggc
ccagatgacatccccccccctcccaccactgctccaccagaccctcccttctcctctgct
ccaccactaggttggagagccaagtcttctcagcagccctctgtctccgtgtcccagtcc
acatccacctctgcacactaccagcccttcacccagtcagcgcacttcacccatagtggc
agggagagggcaggtgctcccccaaccggccccattggaggagcaggcgaccacacaacc
tcatattcacatgctgctgcccacacggttcaaagcaggactgcttcgcggaaggttgcc
tatactggggaacctgttggagctggcattggagctggtggaggggcaaaggcggggggg
cttaggagaggctacaacagcgctgtcccaccatccagcattgccactgtaatgccccag
caacaacagactacccagagtcaaccccagcgggtagaccgcagtgcagctggagcaggg
ggtcctaaaggcggagcccggagaggtaagggccccctgatgaagcaatccaaggtagag
gacctgcgtgcggcccaaggtacacttggggcaaaaggctcgttggagaaaagttccatt
cccatacccaccattattgtcaaggctccttcaaccagcagcagtggacgcagcagccag
ggcagcagtgtggaggcggatgctccagcaccaggggagacggatgaaagcaaaacaccc
cacggtccaccaccctccactcctgctccccaaccccctgctccgccttccattccagct
ccgccacctccaactttgccttctatccgcgcccaagaaaacctggactttaccagccag
tttggggctgccattgttggcgcagctcgccgagacagagaacgatttcatgaagctcgc
agaaagagtgcctccttgtttatgtctgttgaggacgacgtgagtcttggaggagtgagt
gatggagtaggagcaaggactcaggtgtcacagcaacagcttagcacacaggctgaaagt
tcatccacacggctgcgcccgtcaaagtctattgatgagggcatgttctctggagacacc
tttatccatcacacccgcagtatgcctccggcctttggtctacctgagtactcctcttct
gccctggattatcagcctaaatctgtgcctactgacttgtacacaccagcaggcaggcag
tcagcaccctctgcaaccaccacctttattcacccactaacaggcaaggctcttgacccc
acatcgccattaggcctcgccctcgctgccagagagcgtgctctgagagatgacagcagg
tacaggcggggaacagaccaccacttcagccgccagatgtcgagtgtggtgtacccttca
tcggctgtcacctctcagcctgtgtcatctgtcgctcagtcctccagcacctcctacctg
gtcacttcatcttctctggctgccactacacccaccgttggccgcccgccatcacccaga
atcctcagaggaggtgggagtatgtggggtgaggagggcggcggaggagagagggagcgg
gaaggaggaggggctcgcgaggggctacgagttcggttctctgaggacaaaacagtccac
acgcaccactaccagtctccgccgtatcaacccacctataaggagagggagcgggagagg
tcaagggaacgggacagggagcagtcaagagaaagagagagagacaaagagagagagggt
tacatgaggagggcagagcaggctgagagctccgcccagcaggggtctcagtctcagcag
ccgcagaggccatcttttctccggatggaaagtcaatctgatgcctatatcttgtccctc
acccctccctctcccccacataccagttctcagcagacagcgaacactactgggagcact
gggactggtctgatggtcctccctccccccgccccctcagttgatgcggacgatgggttt
ggctacgccgatcccctcccacctccgttagagttcgcgaacagcttcgacaggggagga
ggggggatgtcagcatacacaaaacatgggatgcacccaaacagtctgacctcccgcaga
cagcaggtaccaccccctccgccccctcctcccccaccgccaccccctccagccccccag
aaagaagcatttgcaagtgggtttcctgctcacacgccgctgccctcaccccaagcaggg
gactccaccacctccagcctcacatcttatgacagtgaggtggctaacctgactcagtct
gctcactccccctcccaaacatcaccaaaccctctgccaccttcctcaccctctaccctg
cagcccacctcaacagcaggacctccccctcccccgtcaatctcaccaccgcttcctcct
ggatcctaccacagacccttctctatgtcacacccccaccacctttacaacagcactcat
gctcctgggcgctcttctcccacgcctcccctgcacacaattgcacctcccccatcctac
cgtggacatccagtaccgtcctccactgctgccacctctgctccacttaggggcactgcc
tcccatgccacgaccgctagctgtgccgctataaccaccgctgctgccaccacaacaagc
acctccactcagctctaccaggagcgaacacatccaacatcctctgccactatcacaggc
agtcgaaggactggggagcaccaccgccctccccctgctaccaagaaaggagagtcccag
gagacagtggtggactctgggattgaagagcttgacagccgcagcagcagtgaccaccac
ctggacaccatcctctctctaagcggagccggtgtccgtggtgacaggctggaccgaggg
gagaggggagttggaggacgtttggggggaggcggggcaggggagtcagagaggggagga
gatttcctggagtcctacatgagctacttggacggacagactttcgagatgcagaacgcc
acagcagtaacttccacctacccaaaagcgaacaggttcagagagggaggtcgcgtcggg
gatctgcacagacagaccagtactgttcctgcatcctttcactcccaccgacgacgagag
gagcaggaagatgatgatgtcgaggagggaatgtcagaggacgaacgtggcccggatggg
tacagggtgagggacatgcagaccatgggacgtccctcttcaccgtactttgatcgacca
cgcacgcctgagatgaagcctctgtggggcgaggggcaattgacccgtgatgggagcagc
cagtccgggacacttttagaggggaagaggatttacccacctgcatccagtatgaagccc
agcatcatcaatgagctgagcagcaaactgcagcatcgcaccagggacagctggagcagc
cagagagcattgagcagacacagaagcagaaacagattttcagaagactcagcctcagcc
ctgagccccccctcagcccgatcccagtctccgtctccaatctcgatgtcccagccatca
ttgtccccatccccgtcccccacggctacctcccagtaccacaactgggggcgatccccg
tctcctcagcctccagccgcctgtcagcctccagccgcctctcagcctccgcgttctcat
tcaccgctgtccccgacatcttattccccttaccccacctcccccaaacacagacctgtc
taccggaccaaagccctcgaattccagttcatcccaagtcgcgagtcccgtaaagcagaa
tcacacatactccagcgcaggcgagcaccgagccccctcatctccccatcagagaggccg
aaggtgggcccacctcgtccatcctcccttccacttctccccacaacacccctatacagc
gccatctacgacctccgaggttcaattaccccaccatcccctggaaaccctctgggtgat
ccttacttctcgccttctcctccccttttcgccccctctggagcacctcctcctccaaac
tccaatttacttgtttcacgatccctctctccaacacatttcctgtctggggcctcatct
cccccgctgcatcctctccctccacctacctgcctgagttacccccatctaccgcccccg
tccccgacgaagccgtttgcctccaagccgctgccctactggaccaagtatgacgttgca
gactggctgggatacctgaacctgggtgagcacagggagcgtttcctggacaatgagatc
gacggcacccacctgccgtcgctaaccaaggatgattttctggacttgggagtgacacgt
gttggccatcgcatgaatatagaacgggccctgaggactataatggacaggctgtccagc
agccccttccccatctctgttctctcacctcgggaaggactgactgagaggaggagggac
gacgggagtcggagctga
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integrated database retrieval system
