Pleuronectes platessa (European plaice): 128458702
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Entry
128458702 CDS
T09923
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128458702 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128458702 (smarca4a)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128458702 (smarca4a)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128458702 (smarca4a)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
128458702 (smarca4a)
Chromatin remodeling factors
BAF complex
128458702 (smarca4a)
PBAF complex
128458702 (smarca4a)
GBAF(ncBAF) complex
128458702 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
128458702
NCBI-ProteinID:
XP_053299626
LinkDB
All DBs
Position
16:complement(22526114..22539298)
Genome browser
AA seq
1649 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPSPGSTHSMMGPSPGPPGSGHPHPPQGPS
GYPQENMHQMHKPMEAMHEKGMPDDPRYGQMKNMGMRPGGHSGMGPPPSPMDQHSQGYPS
PLGGSEHAPSPGPANGPPSGPMMPVGPPGPVAGPMEGSGDPNQGMGQPNRGGPQGPVGPG
GAGGGPVGAGGPGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPDHLQMAVQGKRPMPGMQ
QQPMPNMPPSTGPGGGPGPGPGPGQANYNRPHGMVGPNMVPPGPSGVPPGMQGQPTNGPP
KSWPEGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPP
MMLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIANRIQELENLPGSLAGDLRTKATI
ELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKI
EQERKRRQKHQEYLNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERI
EKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKLVQALKDKKK
KKKRKKPEAAEGRSSALGPDGEPLDETSQMSDLPVKLIHVDSGKILSGIEAPKAGQLETW
LEMNPGYEVAPRSDSEASDSEDEYEDEEEEEVLPPPPPPPPPIVAPVEEKKKIPNPDSDE
VSEVDVLHIIEHAKQDVDDEYSNASFERGLQSYYAVAHAVTEIVDKQSTLLINGQLKQYQ
IKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMENKRLNGPFLIIVPLSTLSNW
VYEFDKWAPSVHKISYKGSPAARRAFVPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYM
IVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCTT
FEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKC
DMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEES
FSEHLGHSGGVVTGPDLYRSSGKFELLDRILPKLRVTDHKVLLFCQMTTLMTIMEDYFAF
RGFKYLRLDGTTKAEDRGMLLKTFNDPASDYFVFLLSTRAGGLGLNLQSADTVVIFDSDW
NPHQDLQAQDRAHRIGQTNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKS
SGCERRAFLQAILEHEEQDEGGARGGCRTRGAWEEDEVPDDETVNQMIARSEEEFELFMR
MDLDRRREDARNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGRGSRARKEVD
YSDSLTEKQWLKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDGPATPSSSSGRVRDKDEE
VKKAKKRGRPPAEKLSPNPLSLTKKMKKTVDAVIKYKDSNGRQLSEVFVQLPSRKELPEY
YELIRKPVDFRKIKERIRSHKYRGLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDESEGEESEEEEEELDEGSESEPRSVKVKIKLSRKEKGDRSGKGQRRRGR
GARAKPVVSDDDSDEEQEEEHSASGSDDD
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgaccccccgatgggagggacacctcggccgggaccctccccaggccca
gggccatctccaggaggcatgatgggcccgagtccatcaccagggtcaacccacagcatg
atggggcccagtccggggccccctggatctgggcacccccaccctccccagggaccctca
ggatatcctcaggaaaacatgcaccagatgcacaaaccaatggaagccatgcatgagaag
ggaatgcccgatgaccctcgctacgggcagatgaagaacatgggcatgagaccagggggg
cacagtggtatgggaccccctccgagccccatggaccaacactctcaaggttacccgtca
ccattgggtggttcagagcatgcaccgagccctggcccagccaatggccccccctcgggc
cccatgatgcccgtgggtccccccggccccgtcgctggccctatggaaggcagcggtgac
cctaatcagggcatgggtcaacctaaccgtggcggtccccagggtccagtgggaccaggt
ggagcaggaggcggacctgtcggtgctggtgggccaggtgggcccactcctttcaaccag
aaccagttgcaccaactcagggcccagatcatggcttacaagatgctggcccgcagtcag
cccctaccggatcacctgcagatggctgtgcaggggaagaggcccatgccagggatgcag
cagcagcccatgcctaacatgccaccttctaccggacctggaggtgggcctggacccgga
ccgggaccaggtcaagccaactacaacagaccacacggcatggttggtcctaatatggtc
ccccccggaccttcaggggttcccccaggtatgcaaggccagccgaccaacggacctcct
aaatcctggcctgaaggaccaatggtgaacgctgctgctccatccaatcctccccagaag
ttgattccccctcagcccactggcagaccctcgcccgctcctccctctgtgccccccgct
gcctccccagtcatgccccctcagacacagtccccgggtcagcctgcccagcctcctccc
atgatgctgcaccagaagcagaaccgcattacccccattcaaaaaccccgcgggctggac
ccagtggagatcctccaggaaagagaatacaggctacaggcccgtatcgctaaccgcatc
caggagctggagaacctgcccggctctttagctggtgacctgcgcaccaaggccaccatt
gagctgaaggccctgaggctgctgaacttccagagacagctgcgtcaggaggtggtggtt
tgcatgcggcgtgacacggcgttggaaaccgccctcaacgctaaagcctacaagcgcagc
aagcgtcagtctctacgtgaggcccgcatcaccgagaagctggagaagcagcagaagatc
gagcaggagcgcaaacgtcgtcagaaacaccaggaatacctcaacagcatcctgcagcac
gccaaggacttcaaggagtaccaccgctccatcacagcgaagctccagaaggccaccaag
gctgtggccacctaccacgccaacaccgagcgagagcagaagaaagagaacgagcgcatc
gagaaggagcgaatgcggaggctgatggcggaagatgaagagggatatcgtaaacttatc
gaccagaagaaagacaagcgtctggcctacctgctccagcagacagacgagtacgtggcc
aacctcactgagctggtgcgagcccacaagctcgtgcaagctctcaaagacaagaagaag
aagaagaaaaggaagaagcccgaggccgcagagggtcgttcttctgctctgggacctgat
ggagagcctttagatgagaccagtcaaatgagcgacctgcctgtgaagctcatccatgtt
gacagtggaaagatcctgtctgggattgaagcacctaaggctggtcagctggagacctgg
cttgagatgaacccaggatatgaagtagccccacgttcagacagtgaagcgagtgattca
gaagacgagtatgaggatgaggaggaagaggaagtgctgcctccgcccccgcctccgcct
ccacccattgtagctccagtggaggagaagaagaagattcccaaccccgatagtgacgaa
gtatctgaagtggacgtcctgcacatcatcgaacacgccaagcaggatgtagatgatgag
tacagtaatgctagtttcgagcgaggcctgcagtcctactacgctgtggctcatgctgtc
accgagatagtggacaagcagtccacgctgctgatcaacgggcagctcaagcaataccag
atcaagggtctggagtggctggtgtcactttacaacaacaacttgaacggcatcctggcc
gacgagatgggtctcggaaaaacgattcagaccatcgccctcatcacttacctcatggag
aacaagcgcctcaacgggcccttcctcatcatcgtacctctctcaactctatcgaactgg
gtctatgagtttgataagtgggcgccatctgtccacaagatctcctacaaggggtctccc
gctgctcggcgtgcgtttgttcccatcttgcgcagcggcaagttcaacgtgctgctcacc
acgtacgagtacatcatcaaagacaaacaagtgctagctaagctccgttggaagtacatg
attgtggacgagggccatcgtatgaagaaccaccactgtaagctcacccaggtcctgaac
acgcactacctggctccacggcgtgtgctgctcacgggcaccccgctgcagaacaagctc
cctgagctctgggccctgctcaacttcctcctgccaaccatcttcaagagctgcaccacc
tttgagcagtggttcaacgcccccttcgccatgactggagagaaggttgacctgaatgaa
gaagagaccattctgatcatccgtcgtctacacaaggttctccgaccgttcttactgcgc
cgactcaagaaagaagtggaggcccagctgccagagaaggtggagtatgtgatcaagtgc
gacatgtccgccctgcagagggttctgtacagacacatgcaggccaagggagtgctgctc
acagacggctcggaaaaagacaagaagggtaaaggaggcacgaagaccttgatgaacact
atcatgcagctgaggaagatttgcaaccacccttacatgttccagcacatcgaggagtcg
ttctctgagcatctcggtcactctggtggagtcgtcactgggcctgacctgtaccgctcc
tcggggaagtttgagctgctggaccgtatcctgcccaagctcagggtcaccgaccacaag
gtgctgctcttctgtcagatgaccacactcatgaccatcatggaggactactttgccttc
cgcggcttcaagtacctgcgtttggacggaaccaccaaggcggaggaccgcggcatgctg
ctcaagaccttcaacgacccggcctctgattactttgtgttcctgctcagtaccagagct
ggaggcctgggcctcaacctgcagtctgctgacacagtggttatcttcgacagtgactgg
aacccacatcaggacctgcaggcgcaggacagagcccatcgaatcgggcagaccaacgag
gtgcgcgtcctccgcctctgcaccgtcaacagcgtggaggagaagattctggccgcggca
aagtataaactgaacgtggaccagaaggtcatccaggccggcatgttcgaccagaagtcc
tccggctgtgagcgacgggctttcctccaggccatcctggagcacgaggagcaggacgag
gggggggctcgaggtggctgccgcacgaggggggcgtgggaggaggatgaggttcctgat
gatgagactgtcaaccagatgattgccagaagtgaggaggagtttgagctgttcatgcgc
atggatctagaccgacgccgggaggacgctcgcaatcccaagaggaaacctcgtctgatg
gaggaagacgatatgcccagctggattctgaaagacgacgctgaggttgagaggctcacg
tgtgaagaggaggaggagaagatgttcggcagaggttcccgcgcccggaaggaggtggac
tacagcgactcgctcacggagaagcagtggctcaaggccatagaggaaggtaatctagag
gacattgaggaggaggtgcgtcacaaaaagacaacgagaaagcgcaagagagaccgcgac
cacgacggcccggccacgcccagctccagcagcggccgagtgcgggacaaggacgaggag
gtgaagaaggcaaagaaacgtggtcgcccccccgccgagaagctctctcccaaccccctg
tccctcaccaaaaagatgaagaagacggttgacgctgtgatcaaatacaaggacagcaat
ggccgacagctgagtgaagtgttcgtccagctgccgtctcgcaaggagctgcccgagtac
tacgagctgatccgcaaacctgtggacttcaggaagatcaaggagaggatcaggagccac
aagtaccgcggcctgaacgacctggagaaggacgtgatgctgctgtgtcaaaatgcacag
accttcaacctggaggggtctctgatctacgaggattccatcgtgctccagtctgtcttc
accagcgtgaggcagaagatcgagaaggaggacgagagcgaaggagaggagagtgaggaa
gaggaggaggagctggatgaaggctcggagtctgaacctcgttcagtgaaggtgaagatc
aagctcagccggaaagaaaagggcgatcgttcgggaaaaggtcaacgacgaagaggccgc
ggcgctcgggccaaaccggtggtgagcgacgacgacagtgacgaggagcaggaggaggag
cattcggccagtggcagcgatgacgactga
DBGET
integrated database retrieval system
