Pleuronectes platessa (European plaice): 128458722
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Entry
128458722 CDS
T09923
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128458722 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128458722 (ddx5)
03009 Ribosome biogenesis [BR:
pplt03009
]
128458722 (ddx5)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128458722 (ddx5)
Spliceosome [BR:
pplt03041
]
Complex A
U1 snRNP components
U1 related factors
128458722 (ddx5)
Complex B
128458722 (ddx5)
Ribosome biogenesis [BR:
pplt03009
]
Eukaryotic type
Pre-60S particles
Helicases
128458722 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128458722
NCBI-ProteinID:
XP_053299652
LinkDB
All DBs
Position
16:complement(22188804..22194084)
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AA seq
631 aa
AA seq
DB search
MPGYSDRDRGRDRDRGYGGSGGPPRFGGGGGGGRGGGGGGGGGGKFGNPGERLRKKHWNM
DELPKFEKNFYQQHPDVERRPPQEVELYRRTKIITVKGRDCPDPIAKFHEASFPTYVMDV
ITKMNWTDPTPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGP
ICLVLAPTRELAQQVQQVAAEYGKASRLKTTCIYGGAPKGPQIRDLERGVEICIATPGRL
IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ
LAEDFLKEYVQINVGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFV
ETKRRCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVE
DVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASDLIAVLREANQAIN
PKLLQMAEDRGGRSRGGRGGDFRDRDRYSSGRRDFGSFRDRDNGNGRGFDNGPNKFGTNT
QTGGYGNSTGNGSGNGYGGGSFTGNGQSNFASNPTGAFGAQNSFQAPQFAPVKAVAPNGA
GHPPFPFPQAQAPQHHPPPLVPYAMPPQFTQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatactccgacagagaccgcggccgcgacagagacagaggctatggcggtagc
ggaggacctcctcgctttggcggcggcggcggtggaggccgtggtggtggtggaggcggc
ggcggaggaggaaagttcgggaaccccggcgaacggctccgtaagaaacactggaacatg
gacgagctccccaagttcgagaagaacttctaccagcagcacccagacgtcgagcgcagg
ccaccgcaagaagtagaactgtacagaaggaccaaaatcatcaccgtgaaggggagagac
tgcccagacccgatcgccaagttccacgaggccagctttcccacttatgttatggatgtg
atcaccaaaatgaactggaccgacccgacacccatccaggcccaggggtggcctctggct
ctcagtggcaaggacatggtcggcattgctcagactggctctggcaaaactctctcctat
ctgttgcctgccatcgtgcacatcaaccaccagcccttcctggaacgcggcgatgggccc
atttgtctggtgctggcccccactcgtgagctggctcagcaggtgcaacaagtggctgca
gaatacggcaaagcttctcgcctgaagactacctgcatctatggtggagcacctaaaggg
ccacagattcgtgacctggagagaggtgtggagatttgcatcgccaccccgggccgactc
attgacttcctcgagtctggaaagacaaatctccggcgttgcacatatctggtgctggat
gaggccgacagaatgctggacatgggcttcgagccacagatccgaaaaatcgttgaccag
atcaggcctgaccgtcagactctgatgtggagtgctacttggcccaaagaggttcgtcag
cttgcagaagacttcctgaaggaatatgtccagatcaatgtcggggctctgcagctcagt
gccaaccacaacatcctgcagatagtcgacgtctgcaatgacggcgagaaggagaacaaa
ctgatccgtctgcttgaggagatcatgagcgagaaggagaacaaaaccatcatctttgtt
gagacaaagaggcgatgtgatgacctcaccaggaggatgagacgtgacgggtggccagct
atgggaatccatggagataaaagccaacaggaaagagactgggttctcaatgagttcaaa
tacggaaaggctccaattcttattgctacagatgttgcctccaggggtctagatgtggaa
gacgtcaaatttgtcatcaactttgactacccgaacaactcagaggactatatccaccgc
attggcagaacagctcgtagtcaaaagacaggaaccgcttataccttcttcactcccaac
aacatgaggcaggccagcgacctcatcgctgtgctccgcgaggccaaccaggcgatcaac
cccaagctcctccagatggcagaagacagaggaggtcgttcaaggggaggccgaggtggt
gatttccgggaccgggataggtattcctctggaaggcgtgattttggcagttttagggat
agggataatggtaatggtagagggtttgacaacggaccaaataaatttggcacaaacaca
caaactggaggctatgggaacagtactggcaacggcagtggcaatggctacggtggaggc
agcttcactggtaacggacagtccaactttgctagcaacccaaccggggccttcggagcc
cagaacagcttccaggctccgcagtttgcccccgttaaggccgtcgccccgaacggcgca
ggccacccccccttccccttcccccaggcacaggctccacagcatcatcctcctccactg
gtgccgtacgccatgcctcctcagttcactcagtaa
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