Pleuronectes platessa (European plaice): 128458735
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Entry
128458735 CDS
T09923
Symbol
sox10
Name
(RefSeq) transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128458735 (sox10)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128458735 (sox10)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128458735
NCBI-ProteinID:
XP_053299671
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Position
16:complement(21871707..21877278)
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AA seq
478 aa
AA seq
DB search
MSRDEQSLSEQELSPGMSDDSRSLSPGHSSGATGSGDSPLRQQAQLAGLDDASAGCSSVR
SEDEDERFPAGIREAVSQVLNCYDWTLVPMPVRVNSGGKSKPHVKRPMNAFMVWAQAARR
KLADQHPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRKQHKKDYPDYKYQPRRRKN
GKLGSGSGSEAEGHSEGEGPHTRYKGLHLDVALSGGARSPLADGHHPHAAGHSPPTPPTT
PKTEPQSGKAGDGKREGGSGAPGSGKPHIDFGNVDIGEMSHEVMANMEPFDVNEFDQYLP
PNGHPGVGQSAGGAAAATASPASAYTYGISSALAAASGHSAAWLSKQQPPQQHHHGSSLS
SDPSKAQIKSEAGGAGSHFAEAVTAGSHVTYAPLSLPHYSSAFPSLASRAQFAEYADHQA
SGSYYAHPSQASGLYSAFSYMGPSQRPLYTPISDPASVQQSHSPTHWEQPVYTTLSRP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagacgagcagagcttgtcggagcaggagctcagtcccggcatgtcggacgac
agccgctccctgtccccgggtcactcctccggggccacgggcagcggggactcgcctctc
cggcagcaggcgcagctggcgggtctggacgacgcgtcggcgggctgctcctcggtgaga
tccgaggacgaggacgagcgcttccccgcggggatccgcgaggcggtgagtcaggtgctc
aactgctacgactggaccctcgtgcccatgcccgtgcgcgtgaacagcggcggcaagagc
aagccgcacgtgaagaggcccatgaacgccttcatggtctgggcgcaggcggcgcggagg
aaactggccgatcaacacccgcacctgcacaacgcggagctcagcaagaccctggggaag
ctgtggagactcctcaatgagagcgacaagcggcccttcatcgaggaagcagagaggctg
aggaagcagcacaagaaagattaccctgactacaagtaccagccccggcgccgcaagaac
ggaaagcttggctccgggtccggaagtgaggccgagggccactcggagggtgagggcccc
cacacccgctacaagggcctccacctggatgtggccctaagtggaggagcccggtcccct
ctggcagatgggcaccaccctcatgctgcaggtcacagtccccccacaccccccaccacc
cccaagacagagcctcagtctgggaaggcaggagatgggaagagggagggaggctcgggt
gctccgggatctgggaaacctcacattgactttggtaacgtggacattggtgagatgagc
catgaggtcatggccaacatggagccgtttgatgtcaatgagtttgaccagtaccttccc
cctaatgggcacccgggggtggggcagagtgctgggggggctgcagctgcaacagcctcc
cctgcctcggcgtacacctacggcatctcctcagctctggcagcggccagtggacactcg
gctgcctggctctccaagcagcagcccccccagcagcaccaccacggctccagtctgagc
tcagacccgtccaaggcccagattaagagtgaggctggaggagccgggagccacttcgca
gaggccgtcacagcggggtcccatgtgacctacgcgcccctcagccttcctcactacagc
tctgctttcccctcactggcctctagggctcagtttgctgaatatgctgatcatcaggcc
tcggggtcgtactacgcccacccaagccaggcctctgggctgtactctgccttctcttac
atggggccctcccagaggcccctgtacacgcccatcagcgacccagccagcgtgcagcag
tcgcacagccccacacactgggaacagcccgtctacactaccctgtcgcggccatga
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