Pleuronectes platessa (European plaice): 128458862
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Entry
128458862 CDS
T09923
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128458862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128458862
03036 Chromosome and associated proteins [BR:
pplt03036
]
128458862
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128458862
Coactivators
SAGA/TFTC/STAGA complex
128458862
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128458862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
128458862
NCBI-ProteinID:
XP_053299868
LinkDB
All DBs
Position
2:22450406..22460502
Genome browser
AA seq
803 aa
AA seq
DB search
MDASTDSTAGNDPGQKTLVGGGGATSSQQGRVGSVQTCNGNHTMNSSGRAAAHGADAVSG
AAVSSGALGSEGLPAAITPPAPTTVIQSPLMHSQSVGSFGNQAAGATVTLVRPPMQNAGS
DATLNGNNNVVAAAAVGQPGVNNVQHSSPGSFSARPHIIKAEPPTTIIQTAPQPAVTYAP
VSCPRAPVTAAAGPVGIRAMTPQMFAPRLPQPCTAQPSVQNFQIPPGMVIIRSETGQLLM
IPQHALAQMQAQSQGGMISRPATQNNVPLGQAPGNISRQVAPTTIIRQGCPAPTTLAATT
TLHRPPILQSSVGAAVPEMTPRTHSQTAGTTVSSVTVSKETMENVNKCKNFLSTLIKLAS
NGKQSTQTAAIVRELTKDLLEGKLEPEEFTSSLYKELKSTPQPYLVPFLKRSLPALRQLT
PDSAAFIQQSQLPQLVSGPVSSTSLTPTTVVLSSPANRLTAPISRPQLQPSIGQQGQTAS
MVLQLQQQRVTVRPQVNLPPTPMVMLRNQAPGRIMLGQQQVQLKGLQPTVFPAAHKNKLR
DAGGTFKDYDDINDVASMAGVNLSEESANILASNSGLVGAVTHSCKDEPFLSCSLLQKRM
LEIGNRYGVTNLGVEVVKFVSHATQQRLRGLLENVSQVARQKNVNFKEDDKHEQNSDVRA
QLRFFHQLDNLEKQRKEEQEREILLKAAKSRARQEDPEQLRLKQKAKEMQQHELAQARQR
EANMTALAAIGPRKKKRILDSQSSSAAAEGSGAGPSLPGGAGASRSRPTRQRITRVNLRD
LLFCLENEKSTSHSHVLYKGFLK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcgacagactccaccgcaggaaacgatcctggacagaaaacacttgttggt
ggcggtggtgcaacttcctctcagcaggggagagtgggctcagtgcagacctgcaacggc
aaccacactatgaactcttcaggtagagccgccgctcacggggctgatgccgtgtcgggg
gcagctgtcagcagcggagcgctggggtctgaagggctgcccgctgccatcacgccgccc
gcgcccaccaccgtcatccagtcgcctctcatgcactctcagagtgttgggagctttggg
aaccaggcggcaggagccaccgtgacgctcgtcaggccgcctatgcaaaacgccgggtcg
gatgcaactttgaatgggaacaataatgtggtggcggccgctgcagtaggacagccaggt
gtaaacaatgtccagcattcctccccgggctctttcagcgccaggccgcacattatcaaa
gcagagccgcccacgacgatcatacagacagcaccgcagcccgctgtcacctacgccccc
gtcagctgtccccgggctccggtgaccgcggctgcgggtccagttgggatccgagcgatg
acgcctcaaatgtttgccccgaggctcccgcagccctgcacagcgcagcccagtgtgcaa
aacttccagatacccccggggatggtgatcatccgcagtgagactggacagctgctgatg
attcctcagcatgctctggcccagatgcaggcccagtcgcagggaggcatgatctctcga
cctgcaacccaaaataacgtgcctcttggtcaggctcctggaaacatcagcagacaagtg
gctcccaccaccatcatccgacagggctgtcccgctccaacaacactcgctgccaccacc
actcttcacagacctcctattcttcagagctcagttggggctgcagtaccagaaatgacc
cccaggactcacagccaaacagctgggaccacagtttcctcagtaacagtgagcaaagag
acaatggagaatgttaataaatgtaagaacttcctgtctacattgataaaactggcatcc
aatgggaagcaatcaacacagactgcagccatcgtgagagagctgactaaggacctgctg
gagggaaaactggaacctgaagagttcactagcagtttgtacaaagagctcaaatccaca
ccccaaccttaccttgtgcctttcctcaagagaagcctcccagccctgaggcagctcact
ccagactcagctgcattcatccagcagagtcagctcccccagctggtctcaggtccagtc
tcctccacctcattgacccccaccacggtggtcctaagcagccctgccaatcgtctcact
gccccaatcagcaggccgcagctgcaaccaagcatcggccagcaaggacagaccgcttcc
atggttctgcagcttcagcagcagagggtgacagtgagacctcaggtcaacttaccaccg
acccccatggtgatgctcaggaatcaggcccctggccgcatcatgctgggacagcaacag
gtccagctcaaagggctgcaaccaacagtcttccctgcagctcacaagaacaagctaaga
gacgctggcggcactttcaaggattatgacgacatcaacgatgtggcctccatggctgga
gtgaacctatcagaggaaagcgccaatatcttagcatccaattctggactagtgggagcg
gtgacacattcctgtaaggatgagcctttcctctcctgctccttgttgcaaaagaggatg
ctggagatagggaataggtatggtgtgactaacctgggtgtggaggtggtgaaatttgtc
tcccatgctactcagcagcgactccggggcctgttagaaaatgtatcccaagtggcccgg
cagaaaaatgtcaactttaaggaggatgacaagcatgagcagaacagcgacgtgcgtgct
cagctgaggttctttcaccagctggacaatctagagaaacaaagaaaagaggagcaggag
agagagatcctcctgaaggcagctaagtctcgagctaggcaagaggacccagagcagctg
cgtctgaaacagaaagcaaaagagatgcagcagcatgagctggctcaagcgagacagagg
gaggccaacatgacggctctggcagccatcggccccagaaagaagaagagaatcctggac
tctcaatcctcctctgctgcagctgagggatcaggagcaggcccctctttgcctggtggg
gctggtgcgtcgagatccagacccacgcggcagcggatcacacgcgtcaatctcagggac
ctgctcttctgtttggagaacgagaaatctaccagtcactctcatgtcctctacaagggc
tttctgaaatag
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