Pleuronectes platessa (European plaice): 128458906
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Entry
128458906 CDS
T09923
Symbol
traf7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128458906 (traf7)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128458906 (traf7)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128458906 (traf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
NBCH_WD40
WD40_like
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
Beta-prop_IFT140_2nd
zf-C3HC4_4
Sina_ZnF
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
zf-C3HC4_3
zf-TRAF
zf-RING_5
WDR90_beta-prop_4th
DUF16
DUF1664
Motif
Other DBs
NCBI-GeneID:
128458906
NCBI-ProteinID:
XP_053299933
LinkDB
All DBs
Position
16:23357634..23369310
Genome browser
AA seq
659 aa
AA seq
DB search
MEASFGPTFSAVAAGAKAEGSSNYKQHRRTPSSSSTLTYSPRDDDDGMPLIGTPRRSDSA
ISIRSLHSESNMSLRSTFSLHEEEDDTESQVFAEQPSVKLCCQLCCSVFKDPVITTCGHT
FCRRCALTSDKCPVDAAKLTVVVNNIAVAEQIGELFIHCKYGCRATASGAGGATASNPTV
AGKPGAFEVDPLGCPFTIKLTTRKEHEVSCDYRPVRCPNNPSCPPLLTMNLEAHLKECEH
IKCPHSKYGCTFIGNQDTYETHLEVCKFEGLKEFLQQTDDRFHEMQLTLSQKDQDIAFLR
SMLGKLSEKLDQLEKNMELKFDVLDENQSKLSEDLMEFRRDASMLNVRGINDELSHINAR
LNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSTGDLLFSGSSDKTIKVWDTCTTYKC
QKTLEGHDGIVLALCIQGNRLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNM
LFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNHLYSGSYQTIKIWDIRSLEC
VHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVIATP
DQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVWTC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtcgtttggcccgaccttctcagccgtggctgctggagctaaagcagaaggg
tccagcaactacaagcagcacaggagaacgccctcctcctccagcactctcacctactcc
cctcgggatgatgatgatggaatgcctctcatcggtactcctcggcggtctgattcagcc
atctcaatccggtctctccattccgagtccaacatgtccctgcgctccacattctctctc
cacgaagaggaggacgacacggagtcccaggtgtttgctgaacagccgtcagtgaaactg
tgctgtcagctctgctgcagtgtctttaaagaccctgtcatcaccacgtgtgggcacacc
ttctgcagacgatgtgccttgacttcagacaagtgcccggtggacgcagctaagctcaca
gtggtggtaaacaacatcgctgtggccgagcagataggagaactcttcatccactgtaaa
tacggctgcagggccacagcaagcggagcagggggggccacggcctccaatcccacggtg
gccgggaagcctggcgcgtttgaagtggacccactgggatgccccttcaccatcaagctg
accacacggaaagaacatgaggtcagttgtgactacaggccagtccgctgtcccaacaac
ccctcctgccccccgctgctcaccatgaacctggaggctcacctcaaagaatgtgagcac
atcaaatgtccacactccaaatatggctgtacgttcatcggtaaccaggacacgtatgaa
acacatctggaggtgtgtaaatttgaggggctgaaagagttcctgcagcaaactgacgac
aggttccacgagatgcagctgactctgtcccagaaggaccaggacattgctttcctgcgc
tccatgttgggcaaactatcggagaagttagatcagctagagaagaacatggagctcaag
tttgatgtgttggatgagaaccagagtaagctgagcgaggacctgatggagttccgtaga
gacgcctccatgctcaacgtaagggggataaatgatgagttgtctcacataaacgcccgg
ctcaacatgggaatcctgggctcatatgacccccagcagatcttcaagtgcaaggggacg
tttgtgggccaccagggtcccgtctggtgcctttgtgtttactccactggggacttgctc
ttttctggatcctcagataagaccatcaaggtgtgggacacctgcaccacctacaagtgt
cagaaaaccctcgagggccacgatggcatcgtgttggctctgtgtatccagggaaaccgg
ctgtacagtggctctgcggactgcaccatcatcgtgtgggacatccagaccctgcagaaa
gtcaacactatccgggcccatgacaacccagtgtgtacacttgtctcctcccacaacatg
ttgttcagcggctccctcaaggccattaaggtgtgggacatcgtgggcacagagctgaaa
ctgaagaaggaactaactggtctgaatcactgggtcagagcactggtggcctcccagaac
cacttgtacagcggctcataccaaaccatcaagatctgggacatccgctctctggagtgt
gtccacgtcctccagaccagcgggggcagcgtctactccatcgctgtcaccaaccaccac
atcgtctgtggcacctacgagaacctcatccacgtttgggacattgagtctaaagagcag
gtgcggaccctcacaggtcacgtggggacagtttatgctctcgctgtgatcgccaccccc
gaccagaccaaagtgttcagcgcctcctatgatcgctccctcagggtgtggagcatggac
aacatgatctgcacccagactctgctcaggcaccagggcagtgtaacggctctggctgtc
tccagggggcgcctcttctccggagccgtcgacagcaccgtcaaggtgtggacctgctag
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