KEGG   Pleuronectes platessa (European plaice): 128458919
Entry
128458919         CDS       T09923                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03013  Nucleocytoplasmic transport
pplt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128458919 (thoc6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    128458919 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pplt03019]
    128458919 (thoc6)
   03041 Spliceosome [BR:pplt03041]
    128458919 (thoc6)
Messenger RNA biogenesis [BR:pplt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     128458919 (thoc6)
Spliceosome [BR:pplt03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    128458919 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_NOL10_N Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_WDR3_2nd Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd NBCH_WD40 EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_SCAP CFAP251_N TRM82_WD WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IP5PC_F DSE1_N Beta-prop_WDR41 WDR54 Beta-prop_VPS8 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_Vps41 WD40_like
Other DBs
NCBI-GeneID: 128458919
NCBI-ProteinID: XP_053299956
LinkDB
Position
16:24932233..24938227
AA seq 323 aa
MDPVELLHMSVFSQSFSPCGRFLAAGNNYGEIALFSLSAALSPDATALSQKPVLTFTAHE
GPIFSLLSTDCFLLSTGNGEISAWSWTELIKKNVKPLWTKRPNYKSSLEIPEINSMAVQS
RDNSLVIGGGDNNVHILDLEHGVFKSVLQGHTDYVHCVSVREREAEVLSGSEDGAVRIWD
SRTGQSVHCIEVYKYESCARPQFGKWISCLTTDSDWMLCGGGPSLSLWHLRSLSPTSIFP
LTGCQRQAAFHQDMILAAGDGAFVSHCRLGGEVKAQIPCSLQSVNTLQLNANSAEHQVLT
VAGSSDHIDVFTNLSYKAFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atggatccagtggagctcctccacatgtccgtcttctctcagagcttctctccctgcggc
cgcttcctggcggctggaaacaactacggtgagatcgccctcttcagtctgtctgcagct
ctgagtccagacgccacagcactgagtcagaaacctgttctgaccttcacagctcacgaa
ggtccgatcttctctcttctctccaccgactgtttcctgttgagcaccggaaacggagaa
atcagcgcctggagctggactgaactcatcaagaagaacgtcaaacctctgtggacgaaa
agaccaaactacaagtccagtcttgagattcctgagattaactcgatggcggttcagtcc
agagacaacagtcttgtcatcggtggaggagacaacaacgtccacatcctggacctggaa
cacggagtcttcaagtctgtcctgcagggtcacacggactacgtccactgtgtgagtgtg
agggagcgggaggcggaggtcctgtcggggagtgaggacggagccgtgaggatctgggac
agcaggaccggacagagtgtccactgcatcgaggtctacaagtacgagagctgtgctcgg
cctcagttcgggaagtggatcagctgcttgaccaccgactctgactggatgctgtgtggc
ggaggtccgtctctgtctctgtggcacctccgctctctgtctccaacctccatcttccct
ctgacgggctgccagcgacaagccgccttccaccaggacatgatcctggcggcgggtgac
ggtgcgttcgtgtctcactgtcggctggggggggaagtcaaagctcagatcccgtgttct
ctacagagcgtcaacacgctgcagctcaacgccaacagcgccgagcaccaggtgctgaca
gtcgcaggaagcagtgaccacatcgacgtgttcaccaacctgtcgtacaaagccttctca
ctcagcttctga

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