Pleuronectes platessa (European plaice): 128459272
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Entry
128459272 CDS
T09923
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04514
Cell adhesion molecule (CAM) interaction
pplt04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128459272 (lrrc4ba)
04517 IgSF CAM signaling
128459272 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pplt04515
]
128459272 (lrrc4ba)
Cell adhesion molecules [BR:
pplt04515
]
Immunoglobulin superfamily
NGL family
128459272 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_NXF1-5
Ig_6
SfmD_perox
Motif
Other DBs
NCBI-GeneID:
128459272
NCBI-ProteinID:
XP_053300371
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All DBs
Position
16:complement(8110628..8145750)
Genome browser
AA seq
734 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EQVPESISVNTRYLNLQENSIQIIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALLRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYKVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETIGDEEPALVATNETIIRIHPGP
TPTRHLWQDGFPTTASSLSGGWSSTTPRTTRPSFTPPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGSSGIGGGQSLRLHHPEMVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTVSGMGLNN
NNNPSSCSQNTSLSCSQVPTSTCGGNTTGGTLPSPVPLPQLGLHSSLKGLMGKGQNEPLL
FKSGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctattgcggctcctcctccctgggccggagttggtaggagccgcttcctcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcaaaacctg
gagcaggtgcccgagagcatatctgtcaacacgcgatacctcaatctgcaggagaactca
atacagattatcaagtctgacaccttcaagcacttgaggcacctcgagatcctccaactc
tccaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaac
acgctggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctgcgggagctgtggctgcgcaacaatcccattgagactctgccaggctatgcc
ttccaccgcgtgccctcgcttcgtcgcctggacctgggtgagctcaagaagttggatttc
atctctgatgcggcattcgtgggcctcatcaatctacggtacctgaacctgggcatgtgt
ggactgaaggacattcccaaattgacagcccttttgcgtttggaggagctggagctgtct
ggaaaccgactggagatcatccgacccggctccttccagggcttagagtctctccgcaag
ctctggctcatgcactcacaggtgtcggtcattgagcgtaatgccttcgatgacctgaaa
agcctcgaggagcttaacctgtcccataactccctgcactccttgccccatgacctgttc
acgccccttcaccagctggagagggtacaccttaaccacaacccctgggtctgcaactgt
gatgtgctttggcttagttggtggttgaaagaaacggtgcccagcaacaccacctgctgt
gcccgctgccatgcgccgccattcttaaagggcaagtacattggagagcttgaccaaagc
cacttcacctgctatgcgcctgtcattgttgaaccaccgacagacctcaatgtcacagag
ggtatggccgctgaactcaagtgtcgcacaagcacctccacgacatctgttaactggata
acccctaatggcactctaatgacacacggctcttacaaggtacggatttcagtcctgcat
gatggcacgctcaactttacaaatgtcaccctgcgagacacaggccagtacacctgcatg
gtcaccaatgctgctggcaacaccacagcaactgctgtcctcaatgtcactgctgctgac
gccagtgtcaactacacctactttacaacagtcactgtggaaacagtagagaccatagga
gatgaggagcctgcgctggttgccaccaatgaaaccatcattcgaattcaccctggcccc
actcccacgcgtcacttgtggcaagatggttttcccaccacagcttcttctctgtcaggt
ggctggtcctctactactccccgcaccacccgacccagcttcactccgcccatcactgag
ccgggcttctcaggtctagatgatgtgatgaagaccaccaagatcatcattggctgcttt
gtagccattactttcatggcagcagtgatgctggtggtgttctacaagttgaggaagcag
caccagctgcataaacaccatggccctgctcgtgccattgagatcatcaatgtggaggat
gagcttggggccggggcaagtggcagaggcagcggcatctcaggaggctccaccgttacg
cagagtggaagcagtggaattggaggtggccagagcctccggctgcaccatccggagatg
gtcaacctgccgaacctggctcggtcagagcacctcaaccactactacaaaacccatcac
ttcaacaacaacatgatgggcctgggcatgggcacagtctccggtatgggcctcaacaac
aacaacaacccctcatcctgctctcagaacacatccttatcctgttcccaggttccaact
tccacatgtggaggaaataccacaggtggcaccttaccctcccctgtaccccttccccag
ctgggtctccacagttctctgaaaggcctcatggggaaaggccagaatgagccactactt
tttaagagtggctccaaagaaaatgtgcaagagactcaaatctga
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