Pleuronectes platessa (European plaice): 128459738
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Entry
128459738 CDS
T09923
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128459738 (chd5)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128459738 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
PHD-1st_NSD
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
128459738
NCBI-ProteinID:
XP_053300561
LinkDB
All DBs
Position
2:4927756..4963273
Genome browser
AA seq
1978 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDLPDEDDEGERTAVPLAPLDTFFTPDEDSLKQQKKKKPKKM
KEGKIPKVKKRKKEGGLQPRVDSDLEEASEVEVERERPEVGSESESSMYGPTKKKKKKPK
EKKEKKPRKKKRDEEDEDDDDDDGNSKEPKSSGQLMQEWGLEDVQYGFTEDDYKTITNYK
AFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVEMVTV
AQPATVGGSQPSSLPGPVKKAKTKEGKGPGVRKRSKSVKEVKKKPKPKKTKSKSGQSGKK
KKASSSEEDFLEESDFDDISIHSASVFSDTLGGAATKKKARRGRKKRKKEDGDGYETDHQ
DYCEVCTQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEDEEE
EEEEEVVVEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCM
CPPLKGKVQKILHWTWGEPPLPAELPDGPDGKPNDPLTKPPLKGRAEREFFVKWAGLSHW
HCSWVSELQLELYHTVMYRNYQRKNEMDEPPPFDYGSGEEELNNEKRKSKDPQYAAMDER
FYRYGIKPEWMVIHRVVNHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPDYDSHIALY
WDHREQILGEDQRPLVARKGTKLKEDHQKKEVPPDAPIIDPTIKFEHQPWYINATGGTLH
PYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTI
INWEREFEMWAPDFYVLTYTGDKDSRATIRENEFTFEDNAVKSGRKVFRMKKDTQIKFHV
LLTSYELITIDQAVLGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQN
NLEELFHLLNFLTPERFNNLDGFLEEFADISKEDQIKKLHDLLGPHMLRRLKVDVFKNMP
AKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPV
AAVEAPVLPNGSYDGSQLVKSSGKLTLLQKMLRKLKDEGHRVLIFSQMTKMLDLLEDFLE
FEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVVIYDSD
WNPHNDIQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKT
GSMSKQELDDILKFGTEELFKDEIEAARAMGDTKDCEEGNVIHYDDDAISNLLDRNRSAT
EDTEIQNMNEYLSSFKVAQYVVKEEEGEEEVEREIIKQEENVDPEYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDTTQEDQEWQGDLSDNQSEYSVGSEDEDEDFEERPEGGRRQ
SRRQMKSERDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRD
LRGKSEREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQ
EFEHVNGKLSSPDLIPIGMELKKLTESVSSDPNTPVPLSPVATQPGTPVPPEKSESLLGS
TEDKETTEQDSKKASEQETSSSEPASAPEKAADSEESKASSEEKTGDERDGSETPSTKTE
PHANPKESALKQAELSSAQISPKTDPCRDPEKAENDSPLAKSEDKENKPDDVKSEDALDG
RLNGDKDTLEELDDSRKEDRNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIW
HRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEIHKSNYLEMKNKFLARRFKLL
EQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLGGNKPANAV
LHKGLRDSNRLLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSE
PPPQQPFSQGAFGCSQMYGSSFAGGFRGPGGQPMVNYSQMPMGPYVSGKDQHLQWDNR
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaggacgacatggattttgaagacgat
ttgccagatgaggatgacgaaggtgagcgcaccgccgttcccctcgcgcccctcgacacc
ttcttcacccccgacgaagactccctcaaacagcagaagaagaagaagcccaaaaagatg
aaagagggaaaaatacccaaagtgaagaagaggaaaaaggagggaggacttcagccccga
gtggacagcgacctggaggaggcctcggaggtggaggtggagcgggagcgtccggaggtc
ggctccgagagcgagagcagcatgtacggtcccaccaagaagaagaagaagaaacccaag
gagaagaaagagaagaagccccggaagaagaagagagatgaggaagatgaggatgatgac
gacgatgatggtaactcgaaagaacccaaatcctcgggccagctgatgcaggagtggggt
ctcgaagacgtccagtatggcttcaccgaggacgactacaaaaccatcaccaactacaag
gccttcagccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtca
aagatgatgacggtgctgggggccaagtggagagagttcagtgccaacaacccgttcaaa
ggcgcgtctgccaccgccgtggccgccgccgtggccgccgctgtggagatggtcaccgtg
gcccagccggcgactgtgggcggcagccagccgagctccctgccggggccggtcaagaaa
gccaaaaccaaagagggcaagggaccgggagtcaggaagagaagcaagtcggtgaaggag
gtgaagaagaagccgaagccgaaaaagaccaaatcaaagtcgggccagagtgggaagaag
aagaaagcctcctcgagtgaggaggacttcctggaggagtccgactttgatgacatcagc
atccacagtgcctcagtgttttccgataccttggggggggccgccaccaagaagaaggcc
cggcgtgggaggaaaaaaaggaaaaaggaggacggggacggctacgagaccgaccaccag
gactactgtgaggtctgcacacagggcggagagatcatcctgtgtgacacgtgtcccaga
gcgtaccacctggtctgcctggaccccgagctggagaaggcccccgagggcaaatggagc
tgcccgcactgtgagaaagagggaatccagtgggaggccaaagatgaggatgaggaggag
gaggaggaggaggaggtggtggtggaggaggaggacgaccacatggagttctgcagagtg
tgtaaagatggaggagagctgctgtgctgcgacacctgcccgtcctcctaccacatccac
tgcctcaacccgccgctgccggagatccccaacggagagtggctgtgtccgcggtgcatg
tgtcccccgctgaaaggtaaagtacagaagattctgcactggacgtggggggagcctcca
ctgccggctgagctgcccgacggccccgacgggaaacccaacgacccgctgaccaagccc
cccctcaagggccgcgcagagagggagttcttcgtgaagtgggcgggtctgtcgcactgg
cactgctcctgggtcagcgagctgcagctggagctgtaccacaccgtcatgtaccggaac
taccagagaaagaacgagatggacgagccgccgccgttcgactacggctccggagaagag
gagctcaacaacgagaagaggaagagcaaggacccccagtacgccgcgatggatgagcgc
ttctaccgctacggcatcaaacccgagtggatggtgatccaccgggtggtcaaccacagt
tttgataaagatggcgatgtgcactacctgatcaaatggagagacctgccctacgaccag
tgcacctgggaggtggatgacttcgacgtcccagactacgacagtcacatagctctctac
tgggaccacagggagcagattctaggggaggaccaacgccccctggtggcgaggaaagga
acaaaactcaaagaggaccatcagaaaaaggaggtccctcctgacgctcccatcatagat
ccaaccatcaagttcgagcaccagccgtggtacattaacgccactggaggaacgctgcac
ccgtaccagctggagggcctgaactggctgaggttctcctgggctcagggcaccgacacc
atcctggccgacgagatgggactgggaaagacggtgcaaaccatagtgttcctctactca
ctgtacaaggagggtcactccaaggggcctttcctggtgagtgcgccgctctccaccatc
atcaactgggagcgggagttcgagatgtgggccccggacttctacgtgttgacgtacacc
ggggacaaagacagcagggccacgatccgggagaacgagttcaccttcgaggacaacgca
gtgaaatcaggcagaaaggtgtttcgcatgaagaaagacactcaaatcaagttccacgtg
ctgctgacgtcctatgagctgatcaccatagatcaagccgtgctgggctccatcacctgg
gcctgtctggtggtagacgaggcccacaggctgaagaacaaccaatcaaagttttttagg
attctgaacgggtataagatttactacaagctgctgctgactgggacgcctctgcagaac
aacctggaggagctgttccacctgctcaacttcctcacaccggagcgcttcaataacctg
gacggcttcctggaggagttcgccgacatctccaaagaggaccagatcaagaagcttcac
gacctgctcggccctcacatgctccggaggctgaaggtcgacgtgttcaagaacatgccg
gcaaagacggagctgatcgtccgggtggagctcagccccatgcagaagaaatactacaag
ttcatcctgacgcggaacttcgaggccctgaactccaaaggtggagggaaccaggtgtcg
ctgctgaacatcatgatggacctgaagaagtgctgcaaccacccctacctgttccctgtg
gctgctgtggaagctcctgtgttacccaacggttcttatgacggcagccagctggtgaag
tcctcagggaaactgacgctgcttcagaagatgctgaggaaactcaaggacgagggacac
agagttctcattttctctcagatgacaaagatgttggatcttctggaggatttcttggag
tttgaaggttataaatatgagcgaattgacggaggaatcaccggaggcctgagacaggag
gccatcgaccgcttcaatgcgccgggggctcagcagttctgcttcctgctctcaacacga
gccggaggcctcggcatcaatctggccagcgccgacacggtggtcatttacgactccgac
tggaatcctcacaacgacattcaggctttcagcagggcccaccgcatcggccaaaacagg
aaggtgatgatctaccgcttcgtgacacgaggctcggtggaggagcggatcacccaggtg
gcgaagaggaagatgatgctcacccacctggtggtgcggccgggcctgggctccaaaacc
ggatccatgtccaaacaggagctggacgacatcctcaagtttggcacggaggagcttttc
aaagatgaaatcgaggcggcccgggccatgggtgacaccaaagattgcgaggagggcaac
gtgattcactacgacgacgatgccatctccaacctgctggaccgcaaccggagcgccacc
gaggacacggagatccagaacatgaacgagtacctgagctccttcaaggtggctcagtac
gtggtgaaggaggaagagggagaggaggaggtggagcgggagatcatcaagcaggaggag
aacgtggatccagaatactgggagaagctcctccgtcaccactacgagcagcagcaggag
gatctggctcggaacctgggcaaaggcaagcgcatccggaagcaggtcaactacaacgac
acgacgcaggaggatcaggagtggcagggtgatctttcagacaatcagtcggagtactcc
gtggggtccgaggacgaggacgaagatttcgaggagaggcctgaaggaggtcgcagacag
tctcgtcggcagatgaaaagcgagagagacaaacctctgcctccgttactggctcgtgtt
ggaggcagtatcgaggttctggggttcaacgcccgccagaggaaagccttcctcaacgcc
atcatgcgctggggcatgccgccgcaggacgccttcaactcccactggctggtgagggac
ctgcgagggaagagcgagcgagagttcagagcctatgtgtctctgttcatgagacacctc
tgtgagccgggggcggacggggcggagacctttgctgatggcgtcccgcgggaggggctg
tctcgccagcacgtcctcaccaggatcggggtcatgtccctcgtcaggaaaaaggtgcag
gagttcgagcacgtgaacgggaagctgagttctccggatctgattcccatcggcatggag
ctgaagaagctgacggagagcgtgtcctccgaccccaacacgccggtgccactgagcccc
gtggccactcagcccggcacccccgtcccccccgagaagagcgagtccctcctggggagc
acggaggacaaggagaccacggagcaggacagcaagaaagcctcagagcaggagacctcc
agctcggagccggcctctgcacccgagaaggcggctgacagcgaggagagcaaggccagc
tccgaggagaagacgggagatgagagggacggcagcgagacgccctccacaaagacggag
ccacatgccaaccccaaagagtcggctttgaagcaggccgagctgtcctccgctcaaatc
tcacctaaaaccgatccctgcagggacccagaaaaagcagaaaacgattctcctctggcc
aaaagtgaagacaaggagaacaagccagacgatgtgaagagcgaggacgcgttggacgga
cggctgaacggggacaaggacactctggaggagctggacgacagcaggaaggaggacagg
aacgggttcaaagccaagttcatgtttaatattgctgacggaggtttcacagagctgcac
accctgtggcaaaccgaggagcgggccgcgctgtcctccgggaagatgcacgacatctgg
caccgccgccacgactactggctgctggccggcatcgtgacacacggctacgctcgctgg
caggacattcagaatgacccccgctacgctatcctcaacgagccctttaagaccgagata
cacaagagcaactacctggagatgaagaacaagttcctggctcgccgctttaagctgctg
gagcaggccctggtgatcgaggagcagctgcgccgggcggcctacctgaacatgacccag
gaccccagccacccggccatggccctgaacacgcgctttgccgaggtggagtgtctggcc
gagtcccaccagcacctgtccaaagagtcgctgggcgggaacaagccggccaacgccgtg
ctgcacaaaggtctcagagatagcaacagattgctgaaccagctggaggagcttctgagc
gacatgaaggccgatgtgactcgacttcccaacatgttgtcccggatccctccggtgtcg
gcgcggctgcagatgtcggagaggagcatcctgagccgcctcaccagccgaggcagcgag
ccgccgccgcagcagcctttcagccagggggcgttcggctgctcccagatgtacggcagc
agcttcgccggcggcttcaggggcccgggggggcagcccatggtgaactacagtcagatg
ccgatgggcccctacgtcagcggtaaggatcaacacctgcagtgggataacaggtga
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