Pleuronectes platessa (European plaice): 128459753
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Entry
128459753 CDS
T09923
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128459753 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128459753 (rev3l)
Enzymes [BR:
pplt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128459753 (rev3l)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
128459753 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
128459753
NCBI-ProteinID:
XP_053300577
LinkDB
All DBs
Position
17:complement(2786057..2855601)
Genome browser
AA seq
3040 aa
AA seq
DB search
MFAVRIVTADFYLARPLKDLDVCYSDFRESDVKKVPVVRIFGSTPAGQKTCLHIHGVFPY
IYVPYDGYGQQSERYLRQVAFSIDRAINVAMGNPSSSNQHVFKVVLVSGMPFYGYHAKEK
HFMKIYLFNPQMVKRVCELLQSGAVMNKSYQPNEGHIPFLLQFFIDYNLYGMNLVNLGAV
KFRRSPNKEAPDRQTPGSCPSISPWKSPCNSKLNDSTLGGTFVRWEENALPCSLVLEEVE
KQSTCELEVDAVAVDVLNRLEIENQIGRNPGIQAIWEDERLRRREKNQATQIETPESQDR
GSVTSTGSEKVFMKRFKEILKENEFDVTQASSMADEEEDQEDFLGDLTLHLDDLTPEGLP
CTPANTVEVHRDSQPDSVRSSGKIPEEAVVDEEAILSLLENSQTFLPLSQTSNHSPLLDS
SQDHAIIDLLAGLEDDGFSIGQNSQSLPGARSYHCNSDEEEESPELDKEEAELSMIMSQR
WDNKAPEISSLPRPGVKEAEEGFSEEQQDSSDEDMEWSGNNSLFANLSIPQLDGAADESS
DSSLTESSPRSQSSLIVKEKMLGKRNPFPGETVCLEPPSSAKILLECKHPEHRPVHMLDT
EQPLDKHFQSKSCQDSSSECSTGFKVNKGIPYIPPVKHPIPCNIVNHPEVSPICVNKEDM
HPIYSYDKEPSIALDNTDVESFSFSNGKVAKGRKKYDSIKNVETNCLSILQNHRTFSLCY
SELRNCSLKTDLELSQKDNKSPIIRNMSSAPSPMEEDEFLDPQQEEMGQDSEEGDVGELK
IRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLSRKKVGNKKLTDSCSKPVEAQPRRS
RLTKKRLGMTGQKNTFNIVESSTSESQITSSLTSNMSACSQTVDTEMPTSDEKSNKAEPL
KDGLITDEKSNTKDEPETNGICIDERTEQFSQPPATNSTSVSCFSEESREAAEDGLSPLL
DKVTYTTPSALPGSKYTLRAKRKMIYDSEEGEQSSSTPSKNAASDKGSKLKGSNVCSGPE
VKYQKRCKKEPPVIIKYIIINRFKGQKNMLVKMSKLNAEEQLVLLTPDKLQLYNKMAPLR
EFWPKVPESTAVRFPFIEPKAKKQPKRKAKVNSTSKKTDSISTKPKVRMGESVKRTKGCQ
RGPIISSLLPPRPCYCEQVDDQDIEYTDVMAELGYLSDRSPSPTDSTPPRCWSPSDPFMD
SSKQLINPLSDPSLSSTSPDSSTVSSTKQAQNTCRTVRSKKAADSKRKVSKSVTKPPEEQ
ELKKEKLRQRNVGAPRHNKKAKDVAEGTVISSTTTTKPKRSRKKKPEEPKSHELSKDSSQ
LLFPEDDLPPFENSSQEVTSFQLPVSTDCNNQGTSQPTSTSDSKSVAQSLEPKVEDYETS
ITEVNQSCAPPVQLKQQSCQTTVVKAEASQEECTAPTPPLLGRLLPEDSKDPQPAVTPPH
SGLKNGETPPLHDNPSGLAVLKQLLQKRQQAQSLPLQVVGTESHYTAIAQAAALLDPTTK
TAKIRKAPSTYNRKPRVPKSTTTKDKKPRIRRSKMSNTQPNVTDKDSMSDDYPLIMSDPG
LDTCNLIEDSLSPELPHNYNFDINAIDQTEFSSPYSGSQFVLTDKNLPVKFLSDVSQEAV
SAQTLDIEKNNDRLFGYGDELQRSSDWHKARPASPDLFDRSENRVPVTNHLTFLDSERIK
SKEWDFSLCKAQTLSPFQDFHCERKELLFSVFDPVLPLPLSSASFLDHEGSPIGEFLEGT
DGLTSTTPSSSPRSIGSVSQVRASQLPRGTGGGAHILKPLMSPPSREEIFNTLLDLEISE
ATFQEPFCSDPSDAPGKPMEVGGRKLTVGTRLAKELSEFSGDLSLEGLHFWKTAFSVMTH
PPTTITSSSQAQGAEPSVGSKGQAESDPSSASDKKVVLLPCKNPPNREHVCQWLEAKKQY
ECLQKWRRDTGLLNNDRAGLKVEEENPANSVQPSASCCSAVKFELCGNLSSTRSQRRKKR
SLSLIISPMKNTGCLSKSSEESPVSDEDALDFEREEEQVKDTDDDDGDNKTSSPESPELH
PWQQACQPSPSGPEQLSEKKESENSPEPLSPRPSNSLERLGDNYSLSPLHRSNMDEGRTS
PHLLHSTPFLRRRQRREEKFEPVCSTPISEENPISERLQQKRRSQTGTLRRVLLTTQIQN
QFAALNVPKKETSQIEGPSIANSYGFRVSMQNLQDAKALHEVQYLTLMGMELHARTRRDL
EPDPEFDPICALFYSLSSDAPLQSIESTVLTGAIVVDKDCLNCDQGDKRTAPLLVRSGVY
GLQVKYATDEKMLFQELISIIRRYDPDILLAYEVQMRSWGYLFQRAAVLGVNLCQQLSRV
PGDSVENRFTADRDEYGADTMTEISIIGRITLNLWRVMKTEVTLNNYSFENVAFHVLHQR
FPLYSPRTLSDWFDHNTDLYRWKMVDHYVSRVRGTMQLLQQQDIIGRTSELARLFGIQFF
HVLTRGSQYRVESMMLRVAKPLNYIPITPSVQQRAQQRAPQCIPLVMEPESRFYSNSVVV
LDFQSLYPSIVIAYNYCYSTCLGHMDSLGTPDEFKFGCASLRVPPEHLYQLRNDITVSPN
GIAFVKSSVRKGVLPSMLEEILNTRIMVKQSMKSYKQDRALMKLLGARQLGLKLIANVTF
GYTAASYSGRMPSVEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSMFVLLKGA
TKEQAFKIGNEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESLDQKEPVFDA
KGIETVRRDGCPAVSKILERSIKLLFETRDISQVKQFVQRQCMKVLDGRASMQDLTFAKE
YRGSASYRPGSCVPALELTRRMMVHDRRLEPRVGERVPYVVVYGMPGLPLIQLVRRPMDV
LQDPSLRLNATYYITKQILPPLARMFQLIGVDVFSWYQELPRIQKASCSAGAGGEEAGRK
GTISQYFTTLHCPVCDELTQLGVCSRCRAEPQRVAVTLYQDIRQWESQQDQLLKVCRNCS
GCAERQVPCVSLDCPVLYKLARVNRQLSKAPYLRQLLEQF
NT seq
9123 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggtgcgcatcgtcaccgcagacttctatctagcgagacccttgaaggacctg
gacgtgtgctactctgacttcagggagagcgacgtgaagaaagtgccggtggtgcggata
ttcggatcaacacccgcaggccagaagacatgtcttcacattcatggtgtgttcccttac
atctacgtgccatacgatggctatgggcagcagtcagagcgctacctgcggcaggtggcc
ttcagcatcgacagggccatcaatgttgccatgggaaacccatcctccagcaatcagcat
gtcttcaaagtggtgctggtctctggcatgcctttctatggctaccacgccaaagagaag
cacttcatgaagatctatctgttcaatcctcagatggtcaaaagggtctgtgagctgttg
cagagtggtgcagtgatgaacaaaagttaccagcccaacgagggccacatccccttcctt
ctgcagttctttatagactacaacctgtatggcatgaacctggttaacttgggagctgtg
aagttccgcaggagcccgaacaaagaggcaccagacaggcagacgccaggcagttgtccc
agcattagcccctggaagagcccctgcaactccaagctcaatgacagcaccctggggggc
acgtttgtccgctgggaggagaatgccctaccctgctcattagtcctggaagaggtggag
aagcaaagcacttgtgagctggaagttgatgctgtagctgtagacgtcctcaaccgcctg
gaaattgaaaatcagattggcaggaaccccggcattcaggctatctgggaggatgagagg
ctgaggaggagagagaagaaccaggccacccagatagaaacccctgagtcacaagatcgt
ggttccgtcacttcaacagggagcgagaaagtcttcatgaagaggtttaaggagatcctg
aaagagaacgagtttgacgtgacacaagcctcctccatggctgacgaggaggaggatcaa
gaggattttctcggtgacctcactctccatttagatgacctgactccagagggattaccg
tgtacccctgctaacactgtggaggtgcacagggactctcagccagactcagtgagaagc
agtggtaaaatccctgaggaggctgtggttgatgaagaggccatcttgagtcttctggag
aatagccagaccttccttccgctctcccaaacgtccaaccactcacctctgttagacagc
agccaagaccatgccatcatcgatctgctggcaggcctggaggacgatggtttctccatt
gggcagaattcccagtctctacctggtgccagaagttaccactgcaacagtgatgaggag
gaggaaagtccggagttggacaaagaagaggcagagctcagcatgattatgtcacaacga
tgggacaacaaggcgcctgagatttcgtcattaccaaggccgggtgtgaaggaggcagag
gaaggcttcagtgaggagcagcaggactcctctgatgaagacatggaatggagtgggaat
aactctctgttcgccaacctgtccattccccagctcgatggggcggcagatgagagcagc
gattcatccttaacggagagtagtcctaggtcccaatcttctctcatagttaaagaaaag
atgcttgggaaaagaaatcccttccctggggagacagtctgcctggagccaccttcttct
gccaagatccttctggagtgcaagcaccctgagcacagaccagttcatatgctggacaca
gagcaacctcttgacaagcactttcaatcaaaaagctgccaggacagcagtagtgaatgt
tcaacagggttcaaggttaacaaaggaatcccctacattccaccagtcaagcatcctatc
ccctgcaatatagtcaatcacccagaggtgtctcccatctgtgttaacaaagaggacatg
catcccatttactcctacgacaaggaaccctctatagccttggataatacagatgtagaa
agtttctcatttagtaatggaaaggtggccaaaggtaggaagaagtatgacagcataaag
aatgtagaaacaaactgtctgtccattcttcagaaccacaggaccttctctctgtgttac
tcagagctaagaaactgctctttgaagacagatttggagttaagccagaaggacaataaa
agccccatcataaggaacatgtcctcagccccgtcacccatggaggaggatgagttcctt
gatcctcagcaggaagaaatgggccaggacagtgaggagggagatgttggtgaactcaaa
atcaggtacgaggactatcaggaaaataagacggagaggaccattgtggcccagcaggaa
gctcactacaagttctttcccagtgtcatcctctcaaactgtctcagtaggaagaaagtt
gggaacaaaaagttgactgattcctgcagtaaaccagtagaggcccagcctcgcaggtct
aggctgacaaaaaaaaggttaggaatgacaggacaaaagaatacatttaacatagttgaa
agctctacctctgagagccagattaccagtagcctcacctcaaacatgtctgcttgttca
cagactgtggacacagagatgcctacttccgatgaaaagtcaaacaaggctgagccactg
aaagatgggctcatcacagatgaaaagtcaaacacaaaagatgaaccagaaacaaatggg
atttgtatagatgaaaggacagagcagttttcacagccgcctgccaccaactccacctct
gtttcctgtttttctgaggagagtagagaagctgcagaggatgggttaagcccattgcta
gataaagtcacctataccacaccttcagcccttcccgggagtaaatacactctgagggcc
aaacggaagatgatttatgacagtgaggaaggagaacaatcaagttcaactccttctaaa
aatgcagcttcagacaagggtagcaagctcaagggcagcaatgtctgcagtgggccagaa
gtaaaataccagaaacggtgcaagaaagaaccccctgtcatcatcaagtacattattatc
aacaggtttaaaggacagaaaaatatgctggtcaaaatgtccaaactaaatgctgaggag
cagttggtgttgctgacaccagataagctacagctatacaataaaatggctcctctcaga
gaattttggcccaaggtgccagaatccactgcagtcaggtttcctttcattgaaccaaag
gccaagaaacagcccaaaagaaaagcaaaggtcaactccaccagtaagaaaacagacagc
atctccactaaacctaaagtcaggatgggggaaagtgttaaaaggactaaaggttgtcag
agaggcccaattatatcctctctactaccgcccaggccgtgttactgtgagcaagttgat
gaccaggacattgagtatacagatgtcatggccgagttgggttacctctctgatagatcc
ccaagccctacagactcaactcctccacgttgttggtccccaagtgacccttttatggac
agctccaagcagctgataaacccactcagtgacccatctcttagttctacttctccagat
tcgagcactgtgtcttcaaccaaacaagcacaaaatacgtgtagaactgtcagatctaag
aaagctgcggatagtaaaagaaaagttagcaagtcagttactaagcctccagaggaacaa
gagctcaaaaaagagaaactaaggcaaaggaatgttggtgctccaaggcataataaaaag
gctaaagatgttgctgaaggtacagtcatcagttctacaactaccacaaaacctaaaagg
tctcgcaaaaagaagcctgaggaacccaaaagtcatgagttaagtaaagacagctcgcag
ctccttttcccagaagatgacctgcctccctttgaaaactcctctcaggaggtcacttcg
tttcagctgccagtgagcacagattgcaacaaccagggcacttcccagccaacatccaca
tcagactccaaatcagttgctcagtcattagaaccaaaggtcgaggattatgagacttca
ataacggaagtaaaccaaagctgtgcaccacctgttcagctgaagcaacaaagttgccag
accactgtggtaaaggcagaagcctcacaggaggagtgcacagctcctacacctcctctg
cttggtcgacttttaccggaagacagtaaagatccccaaccagcagtaacccccccacac
tcaggccttaaaaatggggagaccccaccactacatgataacccttctggcttggctgtt
ctcaaacagcttctccagaaaaggcagcaagcacagtcccttcccctgcaagtggttggt
acagagagccactacactgccatagctcaagctgcggcactactagatcctacaactaaa
acagctaaaatcagaaaagctccctcaacctataaccgtaaaccaagggtcccaaaatct
accaccactaaggataaaaagcccagaattaggagaagcaagatgagcaatactcagccc
aatgttacagacaaggacagtatgtcagatgactaccccctcattatgtcagatccaggt
ctggacacctgcaacttaatagaggacagcttgtcaccagagctcccacacaactataac
tttgacataaatgctattgatcagactgaattctccagcccttatagtggtagccaattt
gtcctgactgataaaaacttaccagtgaagttcctaagtgatgttagccaggaagctgta
tcggctcagacactggacattgagaaaaacaatgataggttgtttggttatggagatgag
ctccaaaggagctctgattggcacaaagcaaggcctgccagtcctgacctctttgataga
tctgagaacagggtgcctgtaactaatcacctcacatttcttgactctgagagaatcaag
agcaaagagtgggacttctctttatgtaaagcccaaaccctcagcccctttcaagacttt
cactgtgagagaaaagagctgctcttctcagtttttgatcctgtcctgccactaccttta
agttcagcatcctttcttgaccatgagggctcaccaataggggaatttctggaaggaact
gacggactcacctccaccacacctagtagctccccccgatccatcggctcagtgtcccag
gttagggcgagccagctgccacgggggacaggaggtggagcccacattctcaagcccctc
atgtcccctccaagccgggaagagatcttcaacactctgcttgacctggagatatcggag
gctaccttccaggagcccttctgcagcgacccgtctgatgcccctgggaaaccaatggag
gttggtggccgtaaactaacggtgggtaccagactggcaaaggagctatctgagttcagt
ggagacctgtctttggagggcctccatttctggaaaacagccttctcagtcatgacacac
cctcccaccactattacctcatcctcccaagcccagggagctgaaccctcagtgggaagt
aaaggtcaggctgagtctgacccttcctcagccagtgacaagaaggtcgttctcctgcct
tgcaagaacccaccaaaccgagagcatgtgtgccagtggctggaagccaagaaacagtac
gagtgtttacaaaaatggcgcagagacacagggctgctgaataacgacagggctgggttg
aaggttgaggaggaaaacccagcaaattcggtgcagccgtcagcttcctgctgctctgca
gtgaagtttgagctgtgtgggaacctttccagcaccagaagtcaaaggagaaagaaaagg
agcctgtccttaatcatatctcctatgaagaacacaggctgtctaagtaaatcctcagaa
gaaagtccagtttcagatgaagatgctctggattttgagcgggaggaggaacaagttaaa
gacaccgatgacgacgatggtgataataaaacttcatctccagagtcaccagagctgcat
ccgtggcagcaggcctgtcagcccagcccctcaggcccagagcagctcagcgaaaaaaag
gaaagtgaaaactctccagagccactgtcaccgaggccctctaactccctggagagacta
ggagacaactacagtctctcaccccttcatcgtagtaatatggacgagggaaggacgagt
ccacatcttcttcacagtacccccttcctaaggaggagacagagaagagaggaaaagttc
gagccagtgtgcagtacaccgatttccgaggagaatcccatttctgagagactccagcag
aagaggagaagccagacaggcaccttgagaagagtgttgctgaccacacagatacagaac
cagtttgctgctttgaatgtgccaaagaaagagacctctcagattgaagggcccagcata
gccaactcctatggcttcagagtcagcatgcagaacttgcaggatgccaaggctctgcat
gaggtccagtacctaacactgatgggcatggagctccatgcaaggacccgccgtgacctc
gaacctgaccctgagttcgaccccatatgtgccttattctacagcctcagttctgatgct
cccctgcagagtatagaaagcaccgttctaactggtgccattgtggtggacaaagattgt
ctaaattgtgatcaaggtgacaaacgaacagcgcccctgctggtcaggtcgggcgtctat
gggctgcaggttaaatatgccaccgatgagaagatgctgtttcaggagctgatttctata
ataaggaggtatgaccctgacatcctgctggcatacgaggtgcagatgcgttcctggggc
tacctgttccagcgggcggcagtgcttggtgtgaacctatgccagcagctgtcacgtgtg
ccaggtgactctgtagagaaccgcttcactgcagacagggatgagtacggagccgacacc
atgactgagatcagcatcatcggacgcatcaccctcaacctgtggagggtgatgaagact
gaggtgacattgaacaactacagttttgagaatgtggctttccatgtgctccaccagcgc
ttccccctgtacagcccccgcacactgtctgactggtttgaccacaacacagacttatac
aggtggaagatggttgaccactacgtgagcagagtgcgcggcaccatgcagcttctgcag
cagcaggacatcatcggcagaaccagtgagctggcaaggctgttcgggattcagttcttc
catgttctgacccgaggatcccagtatcgcgttgagtccatgatgctacgtgtggccaag
cctctgaactacatccccatcacacccagcgtccagcagcgagcccagcagagggcgcct
cagtgcataccacttgtgatggagcctgagtcgcgcttctatagtaactcagtggttgta
ctggacttccagtcactctatccctccattgtcatcgcatacaactactgctactccacc
tgcctgggccacatggacagtctgggaacgcctgatgagtttaagtttggctgcgcctct
ctgagagttcctcctgagcatctctaccagctccgcaacgacattactgtgtcacccaat
ggcatcgccttcgtcaagtcctcagtgcgtaaaggagtccttcccagcatgctggaggaa
atcctcaacacaagaatcatggtgaagcagtcaatgaaaagctacaagcaggatagagcc
ctcatgaagctgctgggtgcccgacagcttggactcaagctcattgccaacgtcaccttc
ggatacactgcagccagctactctggccgcatgcccagtgttgaggttggagacagcatt
gtccacaaagccagagaaaccctggagagagccatcaaactggtcaatgacacaaagaaa
tggggagcgcgtgttgtgtatggggacacagacagcatgtttgttttgctgaagggagcc
accaaagagcaggcgtttaaaattggcaacgagatcgctgaggcagtgactgcaaccaat
cccaaacctgtcaagctcaagtttgaaaaggtgtacctcccatgtgtgctgcagacaaag
aagcgctacgtgggatacatgtatgaaagcctcgaccaaaaggaacccgtgtttgacgcc
aaaggaatcgagacagtgcgccgcgacggctgccccgctgtttccaagattctggagcgt
tccattaagctgctgtttgagacgcgggacatcagccaggtgaaacagtttgtgcagcgt
cagtgtatgaaggtcctggacggtcgggccagcatgcaggacctgaccttcgccaaggag
tacagaggcagtgcctcgtaccggcccggctcctgcgtccctgcactggagctcaccagg
cgtatgatggtgcatgatcgtcgactggagccccgtgtgggggagcgggtgccctacgtg
gtggtgtacgggatgcccggcttgcccctcatccagctggtgcggcggccgatggacgtt
ctgcaggaccccagcctccgcctcaacgccacctactacatcaccaagcagatcctgccg
ccgctggcccgcatgttccagctgatcggagtggacgtgttcagctggtaccaggagctg
cccaggatccagaaagcctcctgctctgcaggtgccggaggagaggaagcggggagaaag
ggaaccatttctcagtacttcaccacgctccattgccccgtgtgtgacgagctgacccag
ctgggcgtgtgctcgcggtgtcgtgctgaaccccagagagttgctgtcacactctaccag
gacatcaggcagtgggagagtcagcaggaccagctgctgaaggtgtgcaggaactgcagc
ggctgtgcagagcggcaggttccctgtgtgtccctggactgtcctgtcctttacaagctg
gcccgggtcaacagacagctctccaaggccccctacctccgacagctgctggagcagttc
tga
DBGET
integrated database retrieval system
