Pleuronectes platessa (European plaice): 128459789 Help Entry 128459789         CDS       T09923                                  Name (RefSeq) apolipoprotein B-100 Organism pplt  Pleuronectes platessa (European plaice) SSDB OrthologParalogGFIT Motif Pfam:  ApoB100_beta_belt1 ApoB100_beta_belt2 Vit_open_b-sht Vitellogenin_N DUF1081 ApoB100_4ins TPR_Vitellogenin ApoB100_beta_belt3 ApoB100_arm_9ins ApoB100_6ins NIL UCH Motif Other DBs NCBI-GeneID:  128459789 NCBI-ProteinID:  XP_053300638 LinkDB All DBs Position 17:complement(18234003..18248681) Genome browser AA seq 3308 aa AA seqDB search MPIMEGTKLCLLLLLGTYTLAQQDVTEQSPVCQLAKRFKNFRSFKYDYEAETINGVNGAT DNKSGSKVSCMVEIDVPQTCSFILRTTECSLSEISHVDEQGHAVYTPAAGNEAFKAAMAL NSLKLKVEGLTNVHLYAEDNEAVHILNIKRGIVSALLVPVMEEEKNKEMPTVHGVCSTDF TVNAREDIATDVTITRDLSQCDEFIARRQDTSPLALISGLNYPMSKMISSTQTCNYKFDN QKKHMTSGTCTEKHLFLPMSHQNEYGISASVKQTLNLRETSKINDRIFEANQGNIQSLPM DVSDEKSTIQTKEAAFATFQQLSTLSQTAQGEERAGLFRKLVSQFRGLNAEVLGSAAIEM MDMSMPLTFQALAQCGTPECTSAILKGLRTFDEGALEVDASVYALGMLANPSHLLVKDML AMAQYKNSKPIMYALSNVARKLHQREGVTPEIVAVSEFLASLLGPDCSGEKELTFLTLRV VGNMGAALEDADATIKNTLLKCMRQPLTTLSVQLAAIQAFRRMSVTDEIRSNLQRVCQYP KGAVQKRLAAYLVLMRNPQPSDIEMLKKLIKQENNVQVKSFVTSHVYNIITSADPQTQKL GKTIIDALEDTDVVTHNDYTTKSRSYKLDVAQDDNMKAAIQGNIIFDPSNQLPREMLLET TLNAFGFNLDILEIGMEGKGFEPTIDALFGKNGFFPDTLSKTLYWAEDMMSPNIKEVLEK LVAPLKAEGQKVPENLVKEIVRNFNKLVKDLQNQESPEAMAYLRIMGAELGFIKATDLKF IADNAVMYADILARLIPAQTLSKMMSGTDNEIFAHYIFMDNKFMMSTAAGLPLTFAMTGT FTPGAKGGLRLAPNMKELLFMPSVGVEFMTQMGVHVPEMVASAVEMQTNMYHESTLNAKI SMEKGQVKLSIPAPQGTTKLFRFRNKVLIVGSGKATMIPHTLSDEKCSPLFTGLSYCTET ARALPGTADAPYFPLNGETMFNVDIKPTKEISEYTATIAYNLLSEGEDGHQEVDSLKMTL RAEGDQPTEATATMKYNRNRNVFTTEVQIPDFDVEAGVKVSMADSSAEGKSMILEISNKN VPQLSLIGRAKLQAVTDGMLQVQLIVPSLKADAAITATMSNTDKLTLEIKSDVKLPETSS IQAVVFKYGEDHAEVQLLSNVNADTKILVPYTEALQAWLRQFADDVMEQQVVKTDMRLGH ILNKAVEAGNIWMDKIQADVPYVETLRNRIADVEMPAMPENLFMNLDGKLRYQFNHDRMT VTIPLPLGGKSSEELRIPARLTSPHISLPQVGMNIVPQEIQIPIFTIPSEYDLTMPLMGM VEVSAKLHSNYYNWEATVSAGNKTVESPSYLAQFSIMAESPVKLLSFSTEGAAKITDTEE KTMKLTVDGSLKHMIVETGFNLLETIAVTDNVLTTGRYNIYAVSPLGLDTSLTVTTQFTV DANILSGDINTDGSVTVGPMTATTTYLHTFSVEPMKKEARLESTLRVNSEILKVVNKVKA SYANEELLIESNTNMNSNPIKHTTKMSLSYKDVQLTIQSDSVTKADDRMVRSQMEFSSIE GQATLRIENQADDTVNRAYSLITGSINPSGLEVNTDASMNIFSSLASHKATLTMNTNGLT TSCTTTAQYSPMTFENIFHGGVDTSGATMSLTTKGAIQDNKAELNVEGKLASTEAYFNSI LKGSLYDINARNLVNLRVNEDGLVVSNNMQGSFNEMRTENTHTLSLALKSFSLHSKTDNV LDERNSYMHNIIVNMVPYTASVTVKNDLKIMEINFVNDAQFKAQPYNMELTGTTMGVFSE EELKHTYEIKFIDMVLSAKCNTNGKLLGSHMTHTTDMEIAGLTMKFNDVASLNSPYLRLD STVKTVAAPFTLTIDALLNSDGAMYLNGQQSGELNSKFLLKAEPLLFTHSFECRASSNHE LEGTSPIKTNMENKFNSMLSLQEQSVTLKMKSKVNEHTFDEEISAYNNAEKMGIEMAGAM STSLFTEASEDYSISGFVKYDKNSDSHFVQIPFIEHLPVVIENVKITMMRMMDNSIEMLK EINNKLEISLKFQNKVAELKEVIDNFDYKLFVKDLRKFINSMENVLNNLTTKFPTDKVMN VLKSIKETFMAFIKKHDIANKFNVVYSKLEEILSNYEVEKMIEAIMDEVVKTMKLYQVRE KIQSAFAALRSIDFQPLLKKALAPVQQLVNEIYSFDFKQLIEDVRDYFMSMVQNIRSFDY DTFTMELKEKVTDMTKIPCFGKLYGEFRVTSPHYNLRTTADLENTTTTSVTPEFKMNLNS QATSTLKILDFTTDASAHVALPKMSRLSISENINVDQSCFTLDHKGTITLYGLSAQASAD TTAKVTTELYAAELANKAILAMENGFTATAETNYKQNLNMPPLKIFTEAQINQKTLFQLE DGTARLTFNNLAHEKYAVQDISNEGSHKSYMEVVMDLHTAKVIFDGETGCGEYKMNQNVV ADMCIFRYLIISGKVETETPFMKGSVADVKFQAKVEDMKIDFTASHSAELTGGVEGPLSS TAVASITPNELIFDTKNRANTKLALPFLLSGKVDLQNDMALTLNSEVQQASWTGLARFNQ YKYSHSFTIDNDEKEISIVSQINGEANLDALKQTITIPAMTVPFVGIGTPRLEDVSLWED TLLSDLLLTTQQTLDMNSKLTYKKNPEVITIDINLDPLINVINTNVKTLHKKALIGKDKA AAMLATSYNKAKAEYEKYSIEFPKTITVPAYKVPVMNVEVSTFTIPLPDLTLITMPALHV PSALSKLTLPKITLPKIQSIKIPVLGDLTYEGSVKTAMITLKTDASILNQDHIIIKLDAS SASEFELLTGKIHGNVNVITAGEFKIASVLSVKHPMVEGTHDSAIILSYENIHTSITNSA KVNLPDRTMEIHQEITGNPEEGLVVSMSTPSAGLIAVQMQTKSPAQVKARLYGRYPSEPT TDIDILSLKMSVMNSEKLNIQTTWNMEMPYDMMLEVKSQVPRAVELVSEPAYYTYNEINR KAGRLVESIERASKRGRVMFKRAVDKLATVNPSAVMTDVTDTTIVILRNNQQRVEAVLDA IVKFLRETKFQVYGYEQRLSGLEIYQKLSAFVAEVSEEAVQKIPQYFSHIFGSVLDFIRA IEFTLPGSNHIVSGGEILDDLSVAMRTTQDRVIVTVRKLGNIQVEDIQEKFSLFLQFTTE QSERFLHILKSQNVEKISAFAADVYNDAINSPVVADVARQIEEYTRIVLEYLKTVRAKIQ NIVSDMSTEQLEVDLQSWIDSVVKHMNSFHNNVVDVMKEKSKSVEPYVRVSDRQLDIDIP LPFVAKSN NT seq 9927 nt NT seq  +upstreamnt  +downstreamnt atgcccatcatggagggtaccaagctctgccttttgcttctgctgggaacatacacacta gcccagcaagatgtgacagaacaatctccagtgtgtcaattggccaaaagattcaagaac ttcaggtcgtttaagtacgactatgaagctgagaccattaacggcgtgaatggagctact gacaataagagcggctccaaagtctcctgcatggttgagattgacgtgccccagacctgt agcttcatcctgcgcaccacagagtgctctctgagcgagatctctcatgtggatgagcag ggacacgcagtctacacacccgcagctggaaatgaggccttcaaggctgccatggccttg aactccttgaagctcaaagtcgaaggcctgactaatgttcatctctacgctgaggacaac gaggctgtccacatcctgaacatcaagaggggtatcgtctctgctctgctcgtgcccgtg atggaggaggagaagaacaaggaaatgcccaccgtgcacggagtctgctccactgacttc accgtcaacgcaagggaggacatcgccactgatgtgaccatcacccgggatctttcccag tgcgacgagttcatcgctcgcaggcaggacacgagtcccctggccctcatctctggcctg aactaccctatgtccaagatgatttccagcacccagacgtgcaactacaagtttgacaac cagaagaagcacatgaccagtggcacctgcacagagaagcatctcttcctgccgatgtcc caccaaaatgaatatggaatttctgcttcggtgaagcagaccttgaatctgagggaaact tccaagatcaatgacagaatctttgaagccaaccagggcaacattcagtccttgcccatg gatgtttctgatgaaaagtccaccatccagaccaaagaggctgccttcgccacattccag cagctgagcaccctgtcccagaccgcgcagggcgaggagcgcgccggccttttccgcaaa ctggtgtctcagttccgaggcctgaatgctgaggtcctgggatctgctgccattgagatg atggacatgtccatgccgctgaccttccaagctctggcccagtgtggtaccccagagtgc accagtgccatcctgaagggtctcaggacctttgacgaaggtgctctcgaggttgacgct tctgtctacgccctggggatgctggctaatccctcccacctcttggttaaggacatgctg gcaatggctcagtacaagaatagcaaacccatcatgtatgctctgagcaatgtcgccagg aaactgcaccagagagagggagtcacccccgagatcgtcgctgtgtctgagtttctggct tctcttctgggccccgactgcagtggagagaaagaactgaccttcctgaccttgagggtt gttggtaacatgggagcagcgttggaggatgctgatgccacaatcaagaacaccctgctc aagtgcatgagacagccattgaccacactgtctgtgcagctggccgccatccaggctttc agacgcatgtctgtgacagatgagatccgctctaacctccagagggtttgccagtacccc aagggcgctgtgcagaagcgcctggcagcatacctggttctgatgaggaatccccagccc agcgacattgaaatgctgaagaagctgatcaagcaggagaacaacgtgcaggtcaagtcc tttgtgacctcccacgtctacaacatcattacctccgctgatccacagacccagaagctc ggtaagaccatcattgatgccctggaggacactgatgttgttacacacaacgattacacc acaaagtctcgcagctacaagctggatgtggcccaagatgacaacatgaaggccgccatt cagggcaacattatctttgatcccagtaaccagctgcccagagagatgttgctggagact actctgaacgctttcggtttcaacctggacattttggagattggcatggagggaaaaggc ttcgagccgaccattgatgctctctttggaaagaacggtttcttccctgacactttgtcc aagactctgtactgggccgaagacatgatgtcaccaaacatcaaggaagttctggaaaaa ttggttgctcccctcaaagcagaaggacagaaggtccctgaaaaccttgtgaaagaaatt gttcgcaacttcaacaagctggtaaaagatctgcagaatcaagagtctccagaggccatg gcctacctgaggatcatgggagctgagcttggtttcatcaaggccaccgacctgaagttt attgctgacaacgcagtgatgtatgcagatattttggccaggctcattcctgctcagact ttgtctaaaatgatgtccggaactgacaacgagatctttgcccactacatcttcatggac aacaaattcatgatgtctactgcagctggtttgcctctgacattcgctatgaccggcacc ttcactcctggtgcaaagggaggccttcgccttgctccaaacatgaaggagctgctgttc atgccctccgttggagttgagttcatgactcagatgggagtccatgtccccgaaatggtt gcctccgctgttgagatgcaaaccaacatgtaccatgagagcacgctcaatgctaagatt agcatggagaagggccaggtcaagctttccatccccgcaccacagggcaccacaaagctc ttcagattccgcaataaagtgctgattgttggttccggcaaggctacaatgatcccacac accctgagtgatgaaaaatgcagccctctcttcactgggctcagctactgcaccgaaaca gctcgtgctctccctggcacggccgatgccccttacttccccctgaatggagagactatg tttaatgtggacatcaagcctactaaagagatctctgagtacacagccaccatcgcctac aatctcctcagtgaaggagaagatggccaccaggaggttgattctttgaagatgaccctg agagctgaaggtgatcagccgactgaggccacagccaccatgaaatacaacaggaacagg aacgtcttcaccactgaagtccagatacccgactttgatgttgaagccggtgttaaggtt agcatggccgacagcagtgccgaaggcaaatccatgatcctcgagatctccaacaagaac gtgccccagctctctctgattggccgtgccaagcttcaggccgtgactgatggcatgctg caggttcaactcatagtcccctcactcaaggctgatgctgccatcactgcaacaatgagc aacactgacaagctcaccttagagatcaagagtgatgtcaagcttccagagacctcctcc attcaggcagttgtattcaaatatggtgaagaccatgctgaggtccagctgctgtccaat gtcaatgctgatactaagatcctggtgccttacactgaggccctccaggcctggctcagg cagtttgctgatgacgtcatggagcagcaggttgtcaagactgacatgagactgggtcac atcttaaacaaggcagttgaggccggcaacatctggatggacaaaatccaagctgatgtt ccctatgttgagactctgaggaacagaatcgcagatgtggaaatgcccgccatgcctgaa aacctcttcatgaacctggacggaaaacttagataccagttcaaccatgaccgtatgacc gtcactatccctctgcctctgggaggtaaatcatctgaggagctaaggatacctgcaagg ctcacctcccctcacatctctttgcctcaggtgggcatgaatattgtcccacaggagatc caaatccccatctttaccattccttctgaatatgatctcaccatgcctctgatgggaatg gtcgaagtgtctgccaaactccacagtaactattacaactgggaagccacagtctctgct ggaaacaaaactgttgagtctcccagctacctggcccagttcagcatcatggctgaaagt ccagtcaaacttctctccttctcaactgagggagctgcaaaaatcacagatacggaagag aaaaccatgaaattgaccgttgatggctccctgaagcacatgatcgtggaaacaggtttt aatctgctggagaccattgcagtcacagacaatgttctaacaacaggaagatacaacatc tatgctgtctcccctctgggtctagacacttctctgactgttaccacacagttcactgtc gacgcaaacattctctctggagacattaacacagacggaagtgtgactgttggacccatg actgctaccaccacctatctgcacaccttctctgttgagccaatgaagaaagaagcaagg ttggagagtacactgagagtgaactctgaaatcctgaaggttgtaaacaaggtcaaggca tcttatgcaaatgaggaacttctgattgagtctaacaccaacatgaacagcaacccaatc aagcacactaccaaaatgagccttagctacaaggatgtccagcttaccatccagtctgac tctgtgaccaaggctgatgacagaatggttcgtagccagatggagttctcttccatcgaa ggacaggccactctcaggattgagaaccaagctgatgatacagtgaaccgtgcctactcc ctgatcactgggtccatcaacccctcaggtttggaggtaaacacagatgcctcgatgaac atcttttcaagcctcgcctctcacaaggcaaccttgaccatgaacacgaatggcctgaca accagttgtacaaccactgcccagtatagcccaatgacctttgagaatattttccatggt ggagtcgatacctccggtgctaccatgtctctgaccaccaagggagccattcaagacaat aaagccgagctcaatgttgagggtaagcttgcaagcacagaagcctatttcaacagcatc cttaagggtagcctctatgacatcaacgccaggaacttagtgaaccttagagtgaatgaa gatggcctggttgtctccaacaacatgcaaggatctttcaacgaaatgaggactgaaaat acccacacactgtccctggcgctgaaatcttttagccttcactccaagactgacaacgtt cttgatgagaggaactcctacatgcacaacatcatagtcaacatggtgccttacactgct tcagttactgtaaagaatgacctgaagatcatggagattaactttgtgaatgatgcccag ttcaaggcacagccctacaacatggagctaactggaacaacgatgggagttttctcagag gaagagctcaagcacacgtatgaaatcaagtttattgacatggtcctgtctgcaaagtgc aatacaaatggtaaactcctgggatctcacatgacacataccactgatatggagattgct ggtctgaccatgaagttcaacgatgtcgctagcttaaactcaccatatcttcgtctggac agcacagtcaaaactgttgcagcacccttcactctgaccatcgatgcccttctcaactca gatggtgcaatgtatctgaatggacaacagagcggcgagctgaacagcaaattcctcctg aaagcagaacctcttctgttcacacattcatttgagtgcagagcttcatccaaccatgaa ctggaaggcacatcacctatcaagaccaacatggagaacaagttcaacagcatgcttagc ttgcaagagcagagtgtcacactgaagatgaaatccaaagtaaacgagcacactttcgat gaagaaattagcgcttataataatgcagagaaaatgggtattgagatggcaggagcaatg tcaacctccctctttactgaggccagtgaagattattccatctctggatttgtgaaatat gacaagaacagcgacagccactttgtccagatcccattcattgagcacctgcctgtagtc attgaaaacgtaaagatcactatgatgaggatgatggacaacagcattgagatgctgaag gaaattaacaacaagttggaaatcagtctcaagtttcagaacaaagtggcggaacttaag gaggtcatcgacaacttcgactacaaactctttgtcaaggacctgagaaagtttattaac tcaatggaaaatgtcttgaacaacctgacaaccaagttcccaactgacaaagtcatgaat gtgctgaaatccatcaaggagactttcatggctttcatcaagaaacatgacattgcaaac aagttcaatgttgtttactccaaacttgaagaaatcctctccaactacgaggttgagaag atgattgaggccatcatggatgaggttgttaaaactatgaagctgtatcaggtgagggag aagattcagtcggcatttgctgctctcagatcaattgacttccagcctttgctcaaaaag gctctggcacctgttcagcagcttgtcaatgaaatttattccttcgacttcaaacaactg attgaagacgtgagggattatttcatgtcaatggtccagaatatcagatcttttgattat gacacattcactatggagctgaaagagaaggtgacagatatgaccaaaattccctgtttt ggaaagctctacggagagttcagggtgacatctcctcattacaatctcaggaccactgct gatctggagaataccacaactacatcagtcacaccagagttcaaaatgaaccttaactca caggctacatctactttgaaaatccttgacttcaccaccgatgccagtgcacacgttgcc ctgcccaagatgagtcgtctgtccatttctgagaacatcaatgttgaccagtcatgtttc acacttgaccacaagggaaccatcactctctatggcctgtcagctcaggcttctgctgat actactgcaaaggtcacaactgagctttatgctgcagagcttgccaacaaagcaattttg gccatggaaaatggatttaccgccactgcagaaactaactacaaacaaaacctcaacatg ccaccccttaaaatcttcactgaagcacagataaatcaaaagacccttttccagcttgag gatggcactgcgcgtctgaccttcaacaatcttgctcatgaaaaatatgcagttcaggac atctcaaatgagggatcccacaagagttacatggaagtggtcatggatctccatacagcc aaggtaattttcgacggtgaaacaggatgcggcgaatacaagatgaatcaaaatgtggtt gctgatatgtgcatcttccgatacctaattatcagtggcaaggttgagacagagacacca ttcatgaagggaagtgttgcagatgtcaagttccaggctaaggttgaagacatgaaaatt gatttcactgcctctcacagcgcagagctgaccggaggagtggagggacctctctcaagc actgccgtggcttccatcacacctaatgagcttatatttgacaccaagaacagggcaaac accaagcttgcccttccattcctgctgtctggaaaggtagatctccagaatgacatggct cttacccttaactctgaagttcagcaagctagctggacaggcctggctagattcaaccag tacaaatactcccattccttcaccatagataatgatgagaaagaaataagcattgtttcc cagattaatggagaagctaatcttgatgcattgaaacaaaccatcacaattcctgcaatg accgtgccattcgttggtattgggacaccaagactggaggacgtctcactgtgggaagat actctcctgagtgacctcctactcacaactcagcagacattggacatgaactccaagctg acctacaagaaaaaccctgaggtgattaccattgacattaatttagatccactcatcaat gtcattaatacaaacgtcaagactctgcacaagaaagcactcatcggcaaggacaaggct gctgccatgctcgctacatcttacaacaaggcaaaggcagagtatgaaaaatatagcatt gagtttcccaaaaccattacagtgcccgcctacaaggttccagtgatgaatgtcgaggtg tctacatttaccattcccctgcctgacctcactctcatcacaatgcctgctctgcatgtt ccatctgccctgagtaagctgactcttcccaaaatcaccctgcccaaaattcagagcatc aagatcccagtactgggtgatctgacctatgagggttcagtgaaaacagcaatgatcaca ctcaaaactgatgccagcatcctcaaccaggaccacatcatcatcaaacttgatgcctct tcagcctctgaatttgagcttctgaccggaaagattcacggcaacgtcaacgtaatcaca gctggtgaattcaaaatagcctctgtcctctctgtgaaacatccaatggtagagggaacc catgacagtgccatcatcttaagctatgaaaatatccatacctccatcaccaattcggca aaggtcaatctacctgacagaacgatggaaatccaccaagagattacaggaaatccagag gaaggcctagttgtttctatgtccactccatccgcgggactcattgcagttcagatgcag actaaatccccagcacaagtcaaagcaagactctatggtcgctacccgtctgagccaaca acagacattgatatcctgagtctgaagatgtctgtgatgaactctgagaaactgaacatt cagacaacctggaatatggagatgccatatgatatgatgttggaagtgaagagccaggta cccagagcggtggagctggtgtcagaacctgcttattacacatataacgaaatcaatagg aaagctggaaggcttgtggaatccattgaaagggctagcaagaggggcagagtgatgttc aagagggctgttgacaaactcgcaacagtaaatccttctgctgttatgacagatgtcaca gatacaactattgtgatcctcagaaataaccaacagagagttgaagctgttctcgatgct attgttaaattcttgagagagaccaagttccaggtctatgggtatgagcagagactgtct gggcttgagatctaccagaaacttagcgcttttgttgccgaagtatctgaggaagctgtt caaaagattccacagtatttttcccacatctttggatcagtccttgattttatcagagcc attgaattcaccctccccggctctaaccacattgtgagtggaggagaaattcttgacgat ttgtctgtagctatgagaaccacccaggatagagttattgtcactgtgaggaaactagga aatatccaagtggaagacatccaagagaaattttccttattcttgcaatttaccactgaa caaagtgaaaggtttctccacatcctgaaatctcagaacgtagaaaagatctctgccttt gctgctgatgtgtacaacgatgccatcaactcccctgtcgtagccgatgttgccagacag attgaagagtacaccagaattgttctggaatatctgaaaactgtgagagctaaaatccaa aatattgtgtctgacatgtctactgaacagcttgaagttgacctccagtcctggattgac tcagtggtaaaacacatgaattctttccacaacaatgttgttgacgttatgaaggagaaa agcaaaagtgttgaaccatatgtgagagtaagcgacagacagctggatattgacattcct ttaccatttgtcgcaaaatccaactaa

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