Pleuronectes platessa (European plaice): 128460150
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Entry
128460150 CDS
T09923
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128460150 (prpf39)
Spliceosome [BR:
pplt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128460150 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
Mad3_BUB1_I
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
128460150
NCBI-ProteinID:
XP_053301184
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All DBs
Position
17:10567276..10574146
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AA seq
791 aa
AA seq
DB search
MEDTDLPFSDNTRTGMLDTESTAMESNGDAFLPELPVLGQTAEWSLGQVAPEPLTTILPD
DSDASQDGAGEPQPPTEMNSTELGSVEKAVEQFQLASAQLLREEQPPQPTEEPEQPPQQP
PEHNAESVDAEQEGQEMSVEPSAAVQDGSQDGAEAPQVTEDGMELEEPSKETTEEATVAP
EPPLPSEFEKLFKGCEENPEDFNGWVYLLQYVEQENDLESVRKSFDLFFLRYPYCYGYWK
KYADIEKKHDNVQVAEEVYRRGLQAIPLSVDLWLHYLAYIKENSDPNAPETEGHIRATYE
QSVLAAGTDFRSDRLWESFISWETEQEKLANVTAVYDRILSIPTQLYSQHFQNFKEHVQN
NNPKHFLSEKEFIEMRLELSKSSLSSMVGSDGETPAAEEELPPGTDDLADPAKRVTEIEN
MRHKVIEVRQEVFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNWKEYLDFEIENGS
PERVVVLFERCLVACALYEEFWTKYAKYVESYSTECVRHVYKKACNIHLAKKPAIHLLWA
AFEEQQGNVEEARDILKSLEVAVPGMAMVRLRRVSLERRHGNLEDAELLLREAMDSAEAV
SETSFYAVKLARQLMKVQKSLSKARKVLLDAIEKDQTSPKLYLNLLELEYSGDVTQNQEE
ILACFDRALNSQMPLESRLLFSQRKVEFLEDFGTDINVLVAAYDEQQKLLKESEPTKRKA
ENGYDSSQEPDSKKQRVDDSSAAATAATDAQGNNSAYNYNWYQQYGGWGQNTWGQYNQYP
QYNQYYPPPPT
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggaagatactgacctgccattctcagacaacacccgtactggaatgctggacactgag
tccactgccatggagagcaatggggatgcttttcttcctgaacttccagttttaggccaa
accgctgaatggtccctgggccaggttgctccagagccactcacaaccatcttgcctgat
gactctgatgcatcccaggatggtgctggggaaccacagccaccaactgagatgaattcc
acagagctgggatctgtggagaaggccgtcgagcagtttcagctcgccagtgctcagctt
ctccgagaggagcagccgccacagccgacagaagaaccagaacagccaccacagcagcca
ccagagcacaacgcagagtctgtggacgcggagcaagagggccaagagatgagtgtggag
ccaagtgctgctgtacaagatggcagtcaagacggggctgaggcaccacaggttacagag
gatggcatggagctggaagaaccatccaaagagacaacagaagaagcaactgttgctcca
gagccaccgctgcccagtgagtttgaaaaactctttaaaggttgcgaggagaatccagaa
gacttcaatggttgggtctacctgctgcaatatgtggagcaagagaacgaccttgaatct
gtaagaaagtcatttgatttattcttcctacgctatccctactgctatggctactggaag
aagtatgcagatatcgagaaaaagcacgacaatgtgcaggttgcagaagaggtatacaga
agaggcttgcaggccatccctctcagtgtggacctgtggctgcactacctggcttacatc
aaggagaactcagaccctaatgccccagagacggagggacacattagagctacttatgaa
cagtcagtgcttgcagcaggcacagacttccgctcagaccgtctgtgggagtccttcatc
agctgggagacagagcaagagaagctggcaaatgtcactgctgtctatgatcgcatcttg
agcatcccaacccagctatattcccagcactttcagaacttcaaagagcatgtgcagaac
aacaaccctaaacacttcctgtcagagaaggagttcatcgagatgaggcttgagctctct
aaatccagcctttcgtcgatggtcggcagcgatggagagacgcctgctgctgaggaggag
ctaccacctggaacagatgatcttgctgatcctgcaaagagagtgacagagatcgagaat
atgcgccacaaagtcatcgaggttcggcaggaagtattcaaccacaatgaacatgaagtc
agcaagcgctgggccttcgaggaagggattaagagaccatacttccatgtcaaagcctta
gagaagacccagctgaacaactggaaggagtacctggactttgagattgaaaatgggtct
ccggagcgcgtggtcgttttgtttgaacgatgcctcgttgcctgtgctctctacgaagag
ttttggaccaagtatgcaaaatatgtagaaagctacagcactgaatgtgtgagacatgtc
tacaagaaggcgtgtaacatccacctggccaagaaacctgccatccacctgctgtgggcg
gcctttgaggagcagcagggcaatgtggaggaggctcgtgacattctgaagtccctggag
gtggcagttccaggtatggccatggtgcgccttcggagggtcagtctggagcgtcgccac
ggtaatttggaggacgcagagttgctgttaagggaagccatggattctgcggaggccgtt
tccgagacatctttctacgctgtgaagctggcgaggcagctgatgaaggtgcagaaaagt
ctgagcaaagccaggaaggtgctgctggatgctatcgaaaaagaccagacgagtccaaaa
ctgtatctaaacctgcttgagctggagtacagtggggacgtgacgcagaaccaggaagag
atcttggcttgtttcgaccgagccctgaacagtcagatgcccctggaatctcgcctcctc
ttctcccagcgcaaggttgagttccttgaggactttggcactgacatcaatgtgcttgtg
gctgcatatgacgaacagcagaaactactgaaagaaagtgaacccacaaagcggaaagca
gagaacggatatgacagctctcaggaacctgattccaagaaacaacgtgtggatgacagt
tccgcagcagcgacagcagcgacagacgcgcagggaaacaactcggcttataactacaac
tggtatcagcaatatggcggttggggacagaacacctgggggcagtacaaccaatacccc
cagtataaccagtactacccccctcctccaacatga
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