Pleuronectes platessa (European plaice): 128460433
Help
Entry
128460433 CDS
T09923
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128460433 (cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128460433 (cdc40)
Spliceosome [BR:
pplt03041
]
Complex C
Other components
Step II factors
128460433 (cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
128460433
NCBI-ProteinID:
XP_053301603
LinkDB
All DBs
Position
17:15291753..15304402
Genome browser
AA seq
581 aa
AA seq
DB search
MSAAISSLVSYGSDSDSENESESKTAAGKVDPVDPDAMAHLKPLQSEPTMTLALLNSAPE
VAVKEGVETGVHLDPALKEVTYNPTFETLFAPEFGPMNPFKSQQMSAPRNMLSGFAEPAH
LNNFMFEQQRRTFSTFGYALDPSVDTHNVSTTSYIGSVEDAEKNKGLTVFESGHTKSEKR
KKVKGGDAGEIDNFLGPWAKYADEKDAAKPTEEEKKELDEILAKRQKRGKNEEESPAEEK
TILHVKDMYDYQGRSYLHVPQDVGINLRSAEVPDKCYLPKKQIHVWSGHTKGVSAIRLFP
SSGHLLLSSSMDCKIKLWEVYGERRCIRTFIGHSKAVRDICFNNSGTQFLSAAYDRYLKL
WDTETGKCICPFTNKKVPYCVKFNPDEEKQNLFVAGMSDKKIVQWDIRTKEVVQEYDRHL
GAVNTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC
QSMDNQILIFGAQNRFRLNKKKVFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWK
TTKLYQRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgccataagttccctcgtttcgtacggcagcgattcggactcggagaatgag
tcggaatcgaaaaccgctgcggggaaagtggacccagtggacccggacgccatggcccat
ctcaagcctcttcagtctgaacccaccatgactctggctcttctcaattccgctcccgaa
gtcgccgtgaaggagggtgtggagactggagtacatctggaccctgcgctgaaagaagtc
acctacaacccgacatttgaaaccctgtttgcaccagagttcgggccgatgaatccgttc
aaaagtcagcaaatgtctgcccccaggaacatgttgtctggcttcgcagaacctgctcac
ctcaacaacttcatgtttgagcagcaaaggaggactttctccacctttggttatgctcta
gatccctctgtggacacacacaatgtatccacaactagctacatcggttcagtagaagac
gctgagaaaaataaaggcttaactgtgtttgagagtggacatacaaaatctgagaaaagg
aaaaaggtcaaagggggagacgcaggagagattgacaacttccttggaccctgggcgaaa
tatgccgatgagaaggatgcggccaaaccaacagaggaagagaagaaagagctggatgaa
atcttggccaagagacagaagaggggaaagaatgaggaagaatctccagcagaggagaag
actattctccatgttaaagacatgtatgattaccagggcaggtcctacctccacgttccc
caggatgtgggcatcaacctgcgttctgcagaagttccagacaagtgttatctgcctaag
aaacagattcatgtctggtccggacacaccaagggtgtcagtgcgatccgtctatttcct
agctctggccatctactgctctcctcctccatggactgtaagatcaagctgtgggaagtg
tacggcgagaggaggtgtatacggacgtttattggccacagcaaagcagtacgagacatt
tgcttcaataacagtgggacccagttcctcagtgctgcctatgaccgctacctgaaactg
tgggacactgaaacaggcaagtgcatctgccccttcaccaacaaaaaggtcccttactgt
gtcaagttcaacccggatgaggagaagcagaaccttttcgtggccggcatgtcggacaag
aaaattgttcagtgggacatcagaacgaaggaggtggttcaggagtacgaccgccacctg
ggagccgtcaacaccatcacctttgttgatgagaaccgtcggtttgtcagcacatcagac
gataaaagtctcagagtgtgggagtgggacatccctgtggacttcaagtacattgctgag
cccagcatgcactccatgccagctgtgactctctctccaaatggtaaatggctagcgtgc
cagtccatggacaaccagattcttatcttcggagcccagaaccgcttcaggctgaacaag
aagaaggtcttcaagggccacatggtggccgggtatgcctgccaagtcgacttctcccca
gacatgagctacgtggtctcaggagatgcggatggaaagctgaacatctgggattggaag
accaccaagctttaccaaaggatcaaggctcacgacaaggtttgcatcagcgccctgtgg
catccacacgaaacctccaaggtcatcacctgcggctgggacggacaaatcaaactctgg
gactag
DBGET
integrated database retrieval system