KEGG   Pleuronectes platessa (European plaice): 128460469
Entry
128460469         CDS       T09923                                 
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03082  ATP-dependent chromatin remodeling
pplt03083  Polycomb repressive complex
pplt04110  Cell cycle
pplt04330  Notch signaling pathway
pplt04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    128460469
   03083 Polycomb repressive complex
    128460469
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    128460469
   04350 TGF-beta signaling pathway
    128460469
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    128460469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pplt03036]
    128460469
Enzymes [BR:pplt01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     128460469
Chromosome and associated proteins [BR:pplt03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     128460469
   HDAC complexes
    Sin3A-HDAC complex
     128460469
    BRAF-HDAC complex
     128460469
    REST complex
     128460469
    SHIP complex
     128460469
    MiDAC complex
     128460469
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     128460469
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    128460469
  Chromatin remodeling factors
   NuRD complex
    128460469
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 128460469
NCBI-ProteinID: XP_053301655
LinkDB
Position
17:complement(3240450..3249200)
AA seq 491 aa
MAYTTAGGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEMTKYHSDDYIKFLRYIRPDNMPEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGAVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFFTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKTFNLPMLML
GGGGYTIRNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTREY
MEKIKQRLYENLRMLPHAPGVQMQAVAEDAVPDDAMDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEGEGGRRNVSNQKKGAKRPRADDDDKEAEEKKTVVEIKEEEKTKESSPEKTET
KSVKTEQPSSD
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcgtacacgactgcgggtgggacgaagaagaaggtctgctactactacgacggtgac
gtaggaaattactactatggacagggccaccccatgaaaccacataggatccgtatgact
cacaacctgcttctgaactatggactatacaggaaaatggaaatctatagaccccacaag
gccacagcagaggagatgaccaaatatcacagcgatgactacatcaagttcctccgatac
atacggccagacaacatgcctgagttcagcaagcagatgcagcgcttcaatgttggagag
gactgtcctgtgttcgatggattgtttgagttctgccaactctctgctggtggctctgct
gctggtgcagtgaaactgaaccgacagcagactgacattgcagtgaactgggcaggagga
cttcaccacgcaaagaagtctgaagcctctggattctgctacgtaaatgacattgtgctg
gccatcttggagctgctcaagtaccaccagagggtgctctacattgatatcgacatccac
catggggacggagtggaggaggccttcttcaccacagacagggtcatgactgtgtctttc
cataaatacggggagtacttccctggaactggagacctcagggatattggagctggaaaa
ggcaaatactatgctgtcaacttccctctgcgtgatggtattgacgatgagtcatacgag
caaatcttcaagcctgtgatggccaaggtgatggagatgtaccagcccagtgctgtggtt
cttcagtgtggtgcagactctctgtcaggagaccgcctcggctgctttaacctcaccatc
cgcgggcatgccaagtgtgtggagtacatgaagaccttcaatctcccaatgctcatgctg
ggtggaggaggatacaccatccgtaacgtggcccgctgctggacctatgagacggctgtg
gctctggatacagagatccctgatgaactgccctacaatgactactttgagtactttgga
cctgacttcaagctgcacatcagcccctccaacatgaccaatcagaacacacgggagtac
atggaaaagatcaagcagcggctgtacgagaacctgcggatgcttcctcacgctcctgga
gttcagatgcaggccgtcgcagaggatgctgtcccagatgacgccatggacgaggacacg
gaggatcctgataaacgcttgtccattcgtgccacagataagaggatagcatgcgatgaa
gagttctctgactctgaggatgagggcgagggtggaaggcggaatgtgtccaatcagaag
aagggagcgaaaaggcccagagctgatgatgacgacaaggaagcagaggagaagaaaact
gttgtagagattaaagaggaagagaaaaccaaggagagcagtcctgagaagacggagaca
aaaagtgtgaagaccgagcagcccagcagtgactga

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