Pleuronectes platessa (European plaice): 128460524
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Entry
128460524 CDS
T09923
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128460524 (taf1b)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
128460524 (taf1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
128460524
NCBI-ProteinID:
XP_053301729
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All DBs
Position
17:complement(23068615..23075769)
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AA seq
571 aa
AA seq
DB search
MDEELTAGFREPCSQCSAVDWGISDEGRFYCRSCHNVIERTKEVVDTTFTPGSTRISTIG
RGTRRRKPDRGRHWMICEGFQFILRNQADALLGLGVSAHFKDQVLCQLWRLYLQKSRQAF
TNNPVRSSRLKVHRPGSDSDSVAESSAASASETEGDTNMSSTAASITESCSDWPQRSGSS
DVVSYLTARQKRSRGLMNMPKTLALIHLALLWSRESLTLSDLLRLVNEGHVPYVNAFEEL
PEEMKLDGKDALIFRVESVPSHRLVQRQAHTLLLFLQLQTFPPISRQSLLHPALLSLRYL
ADANLPDDLHPWVCRLMDGACLVDFTFDPQSCPVLPRYDMQTAAVIIVTMKLLFGLDDHT
EWDLSNESGVQQDSEDMFNLRRWFRLTQAALISAQQKRLHDAARKQWKAKKPLYPSRALK
AVVMKRKRTAEQVQMCFEKLSSRPVGVQRCVPSSFIFCWGDEDGADGPSLHHKKLDRVLT
LKHNVQTLSNTTYWHTALRVCDPKKCRSHYSEVEATLPRSFVWLLQLFSFLLSVKPPHLY
EEVLKVERRVLDRRTLRRTGTTSRAEDTMVT
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaactcacggccgggttccgggagccctgctcccagtgctccgcggtggac
tgggggatttcagacgagggtcgcttctactgcaggtcctgccacaacgtcatcgagaga
accaaagaggtggtggacaccaccttcacccccggctccaccaggatctccacgatcggc
agagggacgagacgcaggaaaccagatcgtggtcgtcactggatgatctgtgaaggtttc
cagttcatcctgaggaaccaggccgacgctctgctgggactcggagtctctgctcacttc
aaggatcaggtgttgtgtcagctgtggagactttacctgcagaagagtcggcaggcgttc
accaacaacccagtgaggagctctcgcctcaaagtgcaccgtccaggatccgactccgac
agcgtcgccgagtcgtcggctgcctcggccagtgagacggagggagacaccaacatgtcc
agcaccgccgcctccatcacagagagctgctctgattggccgcagcggtcgggctcctca
gacgtggtcagctacctgacggctcgtcagaagcggagtcgtggtctgatgaacatgccc
aagacgttagctctgatccacctcgctctgctctggagccgcgagtctctgacgctcagc
gacctgctcaggttggtgaacgaaggtcacgtcccgtacgtcaacgccttcgaggaactt
ccagaggagatgaagctcgacgggaaagacgccctcatcttcagagtcgagagcgtcccg
tcccaccggctggtccagcgccaggctcacactctgctcctgttcctgcagcttcagacc
tttcctccaatcagccgccagagtctgctgcacccggcgctgctcagcctgcgctacctg
gccgacgccaacctgcccgacgatctgcacccgtgggtctgccggctgatggacggagct
tgtttggtggatttcacgttcgatccccagtcttgtcccgtgctgccgcggtacgacatg
cagaccgccgccgtcatcatcgtcaccatgaagctcctcttcggcctggacgaccacaca
gagtgggatttatccaacgaatccggtgtccagcaggactcagaagacatgtttaacctg
aggaggtggttccggttgacgcaggcggctctgatctcagctcagcagaagagactccac
gacgccgccaggaaacagtggaaggccaagaaacctctctacccgagcagagccttaaaa
gctgtcgtgatgaaaaggaaacggacagcagagcaggtccagatgtgttttgaaaagctg
tcctctcgtccggtgggcgtccagcgctgcgttccgtccagcttcatcttctgctggggg
gacgaggacggagcggacggtcccagtctgcaccacaagaagctggaccgagtcctgacc
ctgaagcacaacgtccagactctgtctaacacaacctactggcacacggcgctgcgagtc
tgtgaccccaagaagtgcaggagtcattactcggaggtggaggcgacgctgcctcgctcc
ttcgtgtggctgctgcagctcttctccttcctgctgagcgtgaagcccccccacctgtac
gaggaggtgctgaaggtggagagacgagtgctggaccgcagaaccctgaggaggacgggg
accacctccagggccgaggacacgatggtcacctga
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