Pleuronectes platessa (European plaice): 128460691
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Entry
128460691 CDS
T09923
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128460691 (hmbox1b)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128460691 (hmbox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_31
HTH_24
HTH_37
NOC3p
Motif
Other DBs
NCBI-GeneID:
128460691
NCBI-ProteinID:
XP_053301924
LinkDB
All DBs
Position
17:6589267..6611465
Genome browser
AA seq
510 aa
AA seq
DB search
MSEFSEEPRFTIEQIDLLQRLRRSGMTKQEILHALDTLDRLDREHGDKFGRRTSSSSSSS
SSYGVGGASTCNNNSASNTTTTFNNNNTASATTTSSVTCNGNSGAISNVERSAGVHSAAA
ATSTTSKISTATQTQLGSSGGLSLSPSNSYDTSPPPGPPPPSAILPSPVSLVALSQNGRD
SLAATPNGKLSPPRYPVNSAAAARAFGFEATEEDLDIDDKVEEMISRRDSSMVKEEIKAF
LGNRRISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYTLEKTTPGATLNMRP
APLPLEEMEWRQTPPPLTTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGG
HSNSDDIDGNDFTDQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDSAAHSEHQDPISLAV
EMAAVNHTILALSRTGGVPSDIKTESLEDE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtttagcgaggagccgcgcttcactattgagcagatagatctgctgcagcgg
ctgcggcgctccggcatgaccaagcaggagatcctgcatgcgctcgacactctggaccgg
ctggaccgggagcatggcgacaagtttggtcgccgcacctcttcttcctcatcttcctca
tcctcctacggagtaggcggggcaagcacctgcaacaacaattctgcctcgaacacaact
accacattcaacaataacaacactgcctcggcaacaaccacctcttccgtgacatgcaac
ggcaacagcggcgccatcagcaacgtcgaaagaagcgctggcgttcactctgcggccgcc
gccacttctacaacctccaaaatctccaccgccacacagacgcagctcggcagcagcggg
ggactctcgctgtctcctagcaacagttacgacacctccccgcctccaggaccgccaccg
ccctccgccattctgccatcaccagtcagcttggtggcgctgtcgcagaacgggcgcgat
agcttagctgctacacccaacgggaagctgtctcctccacggtatcctgtgaacagcgcg
gccgctgcgagggcctttgggttcgaagccacagaggaagacctggacattgacgacaag
gtggaggaaatgatcagcaggagggacagcagtatggtgaaggaggagatcaaagcgttc
ctggggaacaggaggatctctcaggcagtcgtggcacaagttaccggcatcagccagagc
aggatctcccattggctgctgcagcatggctctgacctaagcgagcagaagaagagggcc
ttctaccgctggtacacgctggagaaaaccacaccaggtgccaccctcaacatgcggccg
gctccgttgcctctggaggagatggagtggaggcaaaccccgccccccctcaccactgcc
cccggcaccttccggctgcgtcgaggaagtcgcttcacttggaggaaagagtgcctggcc
gtgatggagagctacttcaacgacaaccagtacccagacgaggccaaacgggaggagatt
gcaaacgcctgcaacgctgtgatacagaaaccagggaagaagctgtccgatctggagcgg
gtcacctcgctgaaagtttacaactggttcgccaaccgtcgcaaagagatcaagagacgg
gccaacattgaagccacaatcctggagagtcatggtatagatgtccagagtcctggagga
cactccaacagcgacgacatcgatgggaatgacttcacagatcaggcctgtgaccttccc
tatttcgacaagagacctctcagccgaccgtttggcctttaccgactggagcccacctcc
ccaacacaggatgacagcgcagcacacagcgagcaccaggatcccatctccctcgctgta
gagatggccgccgtcaaccacaccatcctggccctgtccagaaccggaggggtccccagc
gacatcaagacggagtccctggaggacgaatga
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