Pleuronectes platessa (European plaice): 128461252
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Entry
128461252 CDS
T09923
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128461252 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128461252 (exosc7)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128461252 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
128461252 (exosc7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128461252
NCBI-ProteinID:
XP_053302063
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All DBs
Position
18:18145454..18148768
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AA seq
300 aa
AA seq
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MATVRVSEAEKVYILHGIRDDLRVDGRGCEDYRHVEIETDVVSNTDGSAKVTLGHTAVLV
GIKADIGKPTPLIPNEGYLEFFVDCSANATPEFEGRGGDELGTELSNTLYKVFNNKHSVD
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAISIAIKAALFNTKIPKVHISADEEGAKEI
ELSDDPYDCVRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTNKGTVTCTR
KVGGGSLDPESIFEMTQAGKRVGKALHAPLMKLLRQEESLGKKRQKCFSAAKNTWKSHFS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtacgagtcagtgaggcggagaaagtctacattttacacggaatacgggat
gatctgagggtggatggacgaggctgcgaggactacagacacgtggagatagagactgac
gtggtgtccaacactgacggatctgctaaagttacactgggccacactgcagtgctggtt
gggattaaggccgatattggcaaaccgacgcccctaatacctaatgaaggttacctggag
ttctttgttgactgttcggccaatgcaacccccgagtttgagggcagaggaggcgacgag
ctggggacggagttgagcaacactctctacaaagtgttcaacaacaaacacagtgtggac
ctgaagagtctgtgtatcagtgcaggagaacactgctgggtgctctacgtggacgtgctg
ctcctgcagtgcgatggaaacttgtacgatgccatttcaatagcgatcaaagcagcactc
ttcaacacaaaaattcccaaagtgcacatctccgcagatgaggagggggcaaaggaaatt
gagctgtcggacgacccgtatgactgcgtgagactgaatgtagaaaacgtcccctgtatc
gtgaccttgtgcaaggtgggccacagacacgtggtggacgcgacgctgcaggagaaggcg
tgctcggtggcgagcctcatcatctcggtcacaaacaagggcacggtcacctgcacgagg
aaggtgggcggaggcagcttggatccagagagcatctttgaaatgacacaggccggtaaa
cgggtcggtaaagctcttcatgctccactcatgaagctgctgcggcaggaggagagtttg
ggaaagaagagacagaagtgcttctctgctgccaaaaacacctggaaatcacatttttcc
tga
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