Pleuronectes platessa (European plaice): 128461488
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Entry
128461488 CDS
T09923
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03013
Nucleocytoplasmic transport
pplt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128461488 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128461488 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128461488 (nup153)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128461488 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128461488
NCBI-ProteinID:
XP_053302399
LinkDB
All DBs
Position
18:14121336..14138434
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AA seq
1501 aa
AA seq
DB search
MTAIRRRNTERRSNDRAMAATGGGKIRSRRYHIASKPYAKSKQQQSGIISRVTDTVKSIV
PSWLQKYFKNEDVTEEEGAVPGTDQNCQSPPPPAPNGSEEGPPRLDGRDSPEPSTSYIEP
STSRASLNFQEYVLSRPPLSRSHLHFAPLEASSPTLGASSNLFSQPSTSSAPGPFSTGFS
LVKEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPEIDRTNSGPQPSQS
SLKKPAFNLSVFGTSSNSTLNSTALNSSQLGYSPFYPGKTMYGGAAAVRSLHTRSGTPYQ
APVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPAAASSPLSPSMDGTN
LDASHFQSKRKRMDSNLPPVQKLMVPAAASVSGNRSVSFRPTLTPGGVGRNVDRTPRETP
TRQSTQLPRATLGLSQSTIGSSGPAYPLSSTPAASSGGSGGGKMKRERTTTRASTKHPEE
DEMVEMPDLPAISLPISASTLPTFSFSPLSVPTSTASKITAVTPAKETFANKEPPMASTP
PFVPFKFSSPIVKATASSPPSFSPSTGFTFSAPVAKLGSSITNGKLSTPIAAVVKPAANK
STEDFEGPFKPAKVLKQGSVLDLLKAPGFASPAAQPSSGSETSPQQTSTQSTAPSSSSTT
TTPLSSSTGFGDINPLNWTCEGCLVPNKPSDAKCVCCSTQQPESKSMDSKPSATTSVGMD
SSTKATSTTTTTTDFGSMFSKPVGTWDCDTCLVLNKPDAVKCVACETAKPGTGLKSSLTL
PSAFSAVKTVSTPTAPVASGFIGFGDKFKKPEGAWECGTCWVENKAEDTKCVACTTTKPG
ASAGASVDSSSASTAPVLGFGDKFKKPEGAWECEVCLVENKAADVQCVACQTVKPGASVE
FKAFGSTASGSSTFGSGGIKFGTSDSTSGSGSGGFKFGTSDSTTGSGSGGFKFGGVFSES
SSGGIKFGISSSESTSNDASASGFKFGSSGEGFKFGAVSSDDKKSEEPSTGSGFKFGASE
GIVFGTGSSSSESNTTKAGFSFGLSKPEEKTSDTTTSSSFPAPVSSQGNSNSAASSNDTT
STSTTTTTTAGSVFGRLGERSLANTTPQGGSTFVSLPTDKEPAAPTFTFGKPEEKKEAAF
LFDAASKEADVAPATSGGFSFGKPSAPTEQPPPAFAFGKPAEKNETSAAEAPKPSFTFGQ
SATGSSFVNDSAASPKPAFSFMASNPTNTTSSTTSSSTTPTPSLFGNSNGSTQAAAPSSF
MFGQPAVTSSDGPPAKAFLFGQSQDSQAPAPSAAPLNSVPAPTPSQSFIFGAPNAAPPAA
APSFGFGAAAPPVASSSGPSAAPPPYVFSSAPAGGFGANQTPSFGSSFGTSFSSTPSQAP
AFGAKTEAAPVFGQQVNSTPVFGAATNSAPGGGFQFGGASAFGATNNTSGVFTFGVGSAA
SPAPSASPSIAPQAAPPGGGFNFNSQPQAFNIGAAKTFTASPGGQPAIAGRKIKTAVRRR
K
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacaccgagagacgctcaaacgacagagccatggcggcc
acgggtggagggaaaattagaagcaggagataccacatcgcctccaaaccttacgccaag
agcaaacagcagcagtcgggcatcatcagtcgggtgacagacacagtcaagagcatcgtt
ccttcctggctgcagaaatatttcaagaatgaagatgtgactgaagaagagggtgctgta
ccagggacagaccagaactgccagtcgccgcctcctcctgctcccaatggcagcgaagag
ggacctcctcgtcttgatggacgtgactccccagaacctagcactagttacatagagccc
tcaaccagtcgggcatccttgaattttcaggaatatgtcctttctcggccccctctgagt
cgctcccaccttcattttgccccactggaggcctcctctccaactctgggggcttccagc
aacctcttctcccagccctccacctcctcagcacctggacccttttcaacaggcttctcc
ttggtgaaagaaatcaaggacaacctctcacagcacgaagatgataacatctccaccaca
agtgggttctcctcccgcgcctctgacaaagatgtccccacttcaaaaacggcatcacta
ccccagctttggtccccagagatagacagaacaaactctgggcctcaaccttcccagtcc
agtctgaaaaagcctgcattcaacctgtccgtttttggaacgtcttccaattcgacatta
aacagcacagcactgaactccagccaacttggatattcacccttctaccctgggaagacc
atgtatggaggggcagcggcagtcaggagccttcacacacgttctggaacaccataccag
gccccagtgaggagacagatcaaggccaagcctgctggagctcagccctgtggtgtgacg
agtgccacagccagacgcatcctgcagtcattggagcgcatgtcaagccctctggctgat
gccaagagaatcccagcagcagcctcatcccccctgtcaccatctatggatggcacaaac
ctagatgcttcacatttccagtccaaaaggaaacggatggattctaacctcccaccggtt
cagaagttgatggttcctgctgcagcctcagtgtcaggaaaccggtctgtgtccttcagg
ccaactttaactcctggaggagtaggacgaaatgtggacaggaccccaagagaaacgccc
acaagacaatcaactcaactacctagggcaaccctaggtctatctcaaagcacaattggc
tccagtggccctgcctatcctctgtccagcacgcctgcagccagcagcggtggctctgga
ggaggcaagatgaagagagagaggaccactacgcgagcctccacaaaacaccctgaggag
gatgagatggttgagatgccagaccttccggcaatttcacttcctatcagcgcctccact
ttacccaccttcagcttctcccctctttctgttcccacctccactgcctccaaaatcact
gctgtcactcctgctaaggaaacatttgcaaataaggaacctccaatggcctccacaccg
ccctttgtacctttcaaattttcctccccaattgttaaagcaactgcttctagcccacct
agcttttccccttctactggatttacctttagtgcacctgtagcaaagttaggttcctcc
ataactaacgggaagctgtccacgcccatagcagcagtggttaagccagcagcaaacaaa
agcacagaagattttgaaggaccctttaaacctgccaaggtcctgaagcagggcagcgtg
ctggatcttctcaaagctcctggttttgcctctcctgctgctcagccctcctcaggctca
gaaacttctccccagcagacctccacacaatccactgccccttcttcctcctccacaacc
accacccccctctcttcatcaacagggtttggggatatcaacccacttaactggacctgt
gaaggctgcttggtgccaaacaagccatcagatgcaaagtgtgtttgctgtagtacccaa
cagccggaatccaaatctatggacagtaagccatcagccacgacctcagttgggatggat
agcagcacgaaggccacctccaccactacgaccaccacagattttggctcaatgttttcc
aaacctgttggaacatgggactgtgacacgtgtcttgttcttaacaaacctgatgcagtc
aagtgtgtggcctgcgaaacggccaaacctgggacaggacttaaatcctcactgactctt
ccctctgccttctcagctgttaagactgtatccacccccacagcccctgttgcctcaggg
ttcattggatttggagacaagtttaaaaaaccagagggtgcatgggaatgtggtacgtgt
tgggttgagaacaaggccgaggacacaaagtgtgtggcttgcacaactaccaaaccagga
gcatcagcaggagcttcagtcgattcatcttcagccagcactgctccagtgttagggttt
ggagataaattcaagaaaccagagggtgcctgggagtgtgaagtctgtcttgtagaaaat
aaggctgctgatgttcagtgtgttgcttgtcaaacagtcaaacctggagctagtgtggag
ttcaaagcttttggttcaaccgcttctggctcctccacatttggctctggaggtatcaag
ttcggaacatctgacagtacctcaggctctggatcgggaggttttaagttcggcacatct
gacagtaccacagggtctggatccggaggtttcaagtttggaggcgtattttcagaatca
tcatcaggtggaatcaaatttggaatttcctcatcagaatccacttctaacgatgcttct
gcctcagggttcaaattcggaagctcaggtgagggctttaaatttggagctgtctctagt
gatgacaaaaagtcagaagagcctagcacaggttctgggtttaagttcggagccagtgag
gggatagtttttggaactgggtcatcaagttcagaaagcaacactactaaggctggcttc
tcttttggactgtcaaaacctgaagagaagacatcggacaccaccacatcatcctctttc
ccagcacctgtttcttctcaaggaaacagcaacagtgcggcatcatcaaatgacacaaca
tcaacctccaccaccacaaccaccactgctggatctgtttttgggagactgggagagcga
agtttggcgaacaccacaccacaaggtggctctacgtttgtctccttaccgacggacaaa
gagccggctgctcccacgtttaccttcgggaagccggaggaaaagaaggaagccgccttc
ctctttgatgctgctagtaaggaggcagatgttgccccggccacttcagggggcttttcc
ttcggcaagcccagtgctccaacagaacaacctccacctgcgttcgcctttggcaagccg
gccgagaagaatgaaacatctgctgcagaggccccaaagccctccttcacctttggacaa
agtgctacaggtagctcatttgtgaatgattctgctgcttccccaaagccagcattttcc
tttatggctagtaatcccaccaacaccactagctccaccacctcctcatccacgaccccg
acccccagtctgtttggcaacagtaacggctccacgcaggctgcagctccaagcagtttc
atgttcggtcagcccgctgtaacctccagtgacgggcctccagctaaagcctttcttttt
ggacagagccaggacagccaggcgcctgctccatcagcagctcctctgaactctgtccca
gccccaactccgtctcagtccttcatctttggtgctcccaacgctgctccgcctgctgct
gctccgtccttcggctttggagcagcagctccccctgttgcctcatcttccggtccgtct
gcagctccccccccttatgtattcagctcagctccagctggaggctttggggccaatcag
actccgtcatttggctcatctttcgggacctctttctcgtccacgccctcacaggccccc
gcatttggggccaaaacagaagcagcccctgtctttggtcagcaggttaactccacacct
gtatttggggcagctacaaattctgcaccaggtggaggctttcagtttggaggagccagt
gcattcggagccacaaacaacacctcgggtgtgtttacttttggagtaggttccgctgct
tctcccgctccctctgccagcccctccatcgcaccccaggcagcaccacctggaggtgga
ttcaacttcaactcccaaccccaagcattcaacattggggcagctaaaaccttcaccgct
tctcccggtggacagccagcgatcgcagggcgcaagatcaagacggcggtgcggcgcaga
aagtaa
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