Pleuronectes platessa (European plaice): 128461814
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Entry
128461814 CDS
T09923
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128461814 (vps50)
Membrane trafficking [BR:
pplt04131
]
Protein recycling
Others
EARP complex
128461814 (vps50)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Kgd4-YMR31
Motif
Other DBs
NCBI-GeneID:
128461814
NCBI-ProteinID:
XP_053302914
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All DBs
Position
18:complement(11555415..11653607)
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AA seq
967 aa
AA seq
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MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELREMREQAIDPQAEQEIINSVEEV
YFSNDSFDMVQHELEKLPPELNLQELEEHRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTALQSNLQLAAVICTNARRQLSVSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKNFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYHRTMEWHEEQDKQEAAPAPDG
AAAAKSDELVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
KLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSKQATSSSTPAHDELSLFQQYLQEGNPFEMHIEEKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDFVDEQTGDAPLKSVSRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMSILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMYESSGLGLISSRLRTTLNRIQENLIDMEALGESAGVHGPAEDRKEKVPSPHLSQLVVL
TNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASELR
KPIYWIVAAKAIDYEQMLLLMSGVKWDIREIMSQHNVYVDVLLKEFEEFNKRLGDVSRHV
RIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDMRPI
PDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctcatggcccggcagggcctgaagagcccccaggagagcatg
gctgacctcagtcctgtggagaacctgaggatccccagcaaggaggagctgcgggagatg
agggaacaggccatcgacccccaggcggagcaggagatcatcaacagtgttgaggaggtc
tacttctccaacgactccttcgacatggtgcagcacgaactggagaagctcccacctgag
ctgaacctgcaggagctggaggagcatcgagacaagctgaagagacaacaggcagcagtt
tctaaaaaggtcgcagatctcattctggagaaacagccctcttatgtcaaggagctggag
agagtaaccgcgttacagtccaacctgcagctggcagcagtcatttgcactaacgcaagg
agacaactgagcgtgtcgaaggaaggattcacagaggccagcctgggtctacttgccaat
cagagacgacgacaactgctgacaggcttgctcaagtctctgaggaccatcaagacactg
caaagaacagatgtaagactcagcgagatgcttgaggaggaagactacccaggtgcaatc
cagctctgtctggaatgtcagaaagctgccagcacctttaaacactacagctgcatcagt
gaattgaattccaaactacaagacaccctggagcaaatagaggagcagcttgatgtcgcc
ctgtcgaagacgtgtaagaactttgatgtttcgcactacaccaaggtccagctggcctac
acgctcctgggcaagacacagaccgctatggaccagctgcacatgcacttcacccaggcc
atccacaacaccgtgttccaagtggtgctgggatacgtggagctgtgtgctggcaacgct
gacaccaagttccagaagatgcagtacaaggacctgtgcacgcacatcaccacggacagc
tacatcccctgcctgacggacctgtgcaaggcattgtgggaggtgatgctgagctaccac
cgcaccatggagtggcacgaggagcaagacaagcaggaggccgcgccagctccagatgga
gcagcagcagcaaagtctgatgagctggttgtggaccgcagctacgtgaagaagaaactg
gagcacggtctgacacggatctggcaggacgtccagttgaaagtgaaggcctacatcctg
ggcacggacatgtctaacttcaaatatgatgatttcatagtggtactggacgtcatcagc
aagttgatgcaggtgggtgaggagttctgtggcagcaagtccgaggtcctgcaggagtca
atcaaacgccagagcgtcaactactttaagaactatcacagggcacgactggaagaacta
aggatgtttctggagaatgagacgtgggaactttgtcctgtcaagtctaacttcaacatc
gcccagctccatgagtttaagttcatgggccagtgtcgctctccgtccgtctccccgagc
aaacaggccacgtcctcgagcacaccggcccacgatgagctgtcactcttccagcagtac
ctccaggaggggaacccgtttgagatgcacatcgaggaaaaggaggaggagacggaggat
gtgcttgcatccaacggatatgagtcagacgagctggagaagagcgtttatcaggattac
gacagtgacagcgatgtccccgaggagctcaagcaggactttgtggacgagcagacagga
gacgcccctcttaagagcgtgtcccgagagaccataagaagcaagaagaagtcagactac
aaccttaataagaccaatgcaccaatcctcaccaacaccaccctcaacgtcatccggctc
gtggggaagtacatgcagatgatgagcatcctgaagccgatcgccttcgacgtcatccac
tgtgtgtctcagctcttcgactactacctgtacgccgtatacaccttctttggacgcaat
gacatgtatgagtcatcgggtctgggccttatcagcagcagactgagaaccacactgaac
cggatccaggagaacctcattgacatggaggcgctaggggagagtgcaggtgtccacggc
ccagcggaagacaggaaggagaaggtgcccagccctcatctcagccagctggtggtcctc
accaacagtgggactctgtatgggctcgcacagagggtggtggccactgaatctctcgtg
tttctggctgaacagttcgagtccctccagtcccacctggacaccatgatgcctgcagcc
aagaagcctttcctgcaacagttttattcccagacggtttctacagccagtgaactcagg
aaaccgatctactggatcgtggcagccaaggccatcgactacgaacaaatgctgctcctg
atgtctggagtgaaatgggacatcagggagataatgtcacagcacaacgtttatgttgac
gtccttttaaaggagtttgaggagttcaacaagcggctgggtgatgtttccaggcacgtg
cgcatcccgctgcctgtgtccaacgtcctttgggagcactgcatccgcctggccaacagg
actcttgtcgagggctacgctaacgtgaagaaatgcagcaacgagggccgcgcgctaatg
caactggacttccagcagttcctcatgaagctggagaagctgaccgacatgagacccatc
cccgacaaagagtttgtggagacctacatcaaggcttattacctgacggagaacgacatg
gagcagttcatcaagaatcacagggagtactccatgaagcagctcgccaacttggtcaac
gtttgcctgggctcacatataaacaagaaggctcgtcagaaactcctggcagccatcgac
gacatcgaccgacccaagagatag
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