Pleuronectes platessa (European plaice): 128461830
Help
Entry
128461830 CDS
T09923
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03022
Basal transcription factors
pplt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128461830 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
128461830 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128461830 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128461830 (gtf2h4)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128461830 (gtf2h4)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128461830 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
128461830
NCBI-ProteinID:
XP_053302937
LinkDB
All DBs
Position
18:complement(797408..832277)
Genome browser
AA seq
463 aa
AA seq
DB search
MNLRVQLKCKNLHEYLRELSPDILDRLYNHPATCLAVYRELPSMAKNYVIRMLFLDQPLP
QAAVALWVNKDNQKDHDECVKVLVGLCLWHSQQLQGGRQGYILNPVFKDNLTIALLGGGT
AWADEGSTLGPDRHSRDIESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLVQAGLMKS
ESGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSASSCSNFTSTP
GTGDEGFIVVETNYRIYAYTNSELQIALVALFSEMLYHFPNVVVAQVTRESVQQAIANGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQADFE
VLRDRAQGLGCLVWQDVAHRTMVVTPQGHSEVKRFWKRQKSHS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcgtgtccaacttaagtgtaagaatttgcatgagtacttgagagagctgagt
ccggacatcttggacagactgtacaaccatccagcaacttgtctggcggtctacagggaa
ctcccctctatggccaagaattatgtgatacgtatgttgttccttgatcagccacttcca
caggcggcagtggcattgtgggtgaataaagacaatcagaaagatcatgatgaatgtgtc
aaagtcttggttggactgtgcctttggcacagtcagcagctccagggtggtcggcaggga
tacattttaaatccagtattcaaagacaacctgacgattgcgctgcttggcgggggcaca
gcgtgggcggatgagggcagcactttgggtcctgaccgccattcacgggacattgagagt
cttgaccgttatgctatggagcgttgggaggtcattctgcatttcatggtgggctctccc
agtgctgccgtcagtcaggacttggcacagctgctagttcaagcaggtctcatgaaaagt
gaatcaggagaggcgccctatataacctcagctggtttccagttcctcctcctggacact
gcctctcagctatggtacttcaccctgcagtacctcaaaactgctcagtctagagggatg
gacctggtcgagatcttgtcattcttattccagctcagtttctctactctcggcagagat
tactcagtggagggcatgagtgagtcgttactcactttcctgcagcacctgcgggagttt
ggactggtcttccagaggaagagaaagtcaaggcgttattaccccaccagactggccatc
actctggctgcaggggtcactactagcgcctcctcctgctccaacttcacttccactcct
ggtactggagatgaaggcttcattgtggtggaaacaaattatcgtatctatgcttacaca
aactccgaactccagatcgctctggtggctctctttagtgaaatgctttatcacttccct
aatgtagttgtggctcaagttacaagggagtcagtacaacaggccatcgccaatggtatc
actgcacagcagattatccactttctaaggaccagagctcaccctgtcatgcttaaacag
actccagtgttacctccaaccataacagatcaaatccgactgtgggagctggagagagat
cgactacagttcacagagggagttctgtataaccagttcctctcccaggctgactttgag
gtgctgcgagacagagctcagggtctgggctgtctggtgtggcaggacgtggctcacagg
acgatggtggtgacaccgcaaggacacagtgaggtcaagaggttctggaaacgacagaag
tcccactcataa
DBGET
integrated database retrieval system
