Pleuronectes platessa (European plaice): 128462316
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Entry
128462316 CDS
T09923
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128462316 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pplt04031
]
128462316 (trim23)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128462316 (trim23)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128462316 (trim23)
GTP-binding proteins [BR:
pplt04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
128462316 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
128462316
NCBI-ProteinID:
XP_053303635
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Position
19:complement(4372223..4380474)
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AA seq
580 aa
AA seq
DB search
MAAAAAGINKQGAVATMETCTRHGRAAHGSTVKVLECGVCEDVFSLQGDKVPRLLLCGHT
VCHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASNQSGMAE
DVLKGMGECIIRCDEDESHTASMYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHE
KTLCPQHQVHAIEFVCLEEPCLTGPLMCCVCKEYGKHQGHKHAVLESEANQIRASILDMA
HCIRTFTDEVSEYSRKLVGIVQLIEGGEQIIEDGIGMAHTEHVPGTAESARSCVRAYFAD
LHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVV
LAKQEINCLLETLQKQQHQFTELADHIQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDG
AGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQA
VVFVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHK
LCCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgccgcagcaggaataaacaagcagggcgctgtggcgacgatggagacatgc
acccgacacgggagagcagcgcatggaagcaccgtcaaggtgctggagtgtggcgtgtgt
gaggacgtcttctctctccagggggacaaggtccctcgtcttttgctctgtggacacaca
gtgtgccacgattgtctcacccggctgccccttcatggcagagcggtccgctgccccttc
gacagacaggtcactgagctgggtgactctggagtttggggcctgaagaagaactttgct
ctgctcgaactcttggagcggctccagaatggagcgtccaaccagtctgggatggcggag
gatgttctgaaaggcatgggagaatgcataatacggtgtgatgaggacgagagccacaca
gcctcgatgtactgcaccgtgtgcgccacccacctgtgtgctgagtgctcacaactcacc
cactccactcgcaccctggccaaacaccgccgggtgccgctggcggacaagcctcatgag
aagaccttgtgcccacagcatcaggtccacgccattgagtttgtctgcctggaggagccc
tgtctaactgggcctctcatgtgctgtgtgtgtaaggagtacggcaagcaccagggacat
aagcatgccgttcttgagtctgaagctaatcagatccgtgcatccattttggacatggcc
cactgcatccgcaccttcacagacgaggtgtccgagtactcgaggaagctggtgggcatc
gtgcagctaatagaaggtggcgagcagataatagaggacggaattggcatggcacacact
gaacatgtccccggcacagcagaaagtgcacgctcctgcgtgcgagcttacttcgcagac
ctccacgagactctgtgtcggcaggaggagatggcgctgagcgtggtggacgctcacgtc
agggagaggctgatctggctgaggcagcagcaggaggacatgaccatcctgctgtctcag
gtgtccaccgcctgccttcactgtgagaaaactcttcagcaggacgactgcagagttgtg
ctggcaaagcaggagatcaactgtttgctggagacactacagaagcagcagcaccagttc
accgagctggcagatcacattcagctggatgctggcatccctgtcaccttcaccaaggac
aaccgggtccacattggtccaaagatggagatccgtgttgtgacactggggctcgatgga
gcggggaaaaccaccatcctcttcaagctgaaacaagatgagttcatgcaacccatccca
actatcggtttcaatgtagagacagttgaatataagaacttgaagttcaccatctgggat
gtgggtggaaaacacaagctcagacccctctggaaacactactatctcaacactcaagcg
gtggtgtttgtgatcgacagctgccacagagacagactgatggaggctcacagcgagctg
gccaaactactgacagagaaggagctgagggacgctttgttgctcatcttcgcaaacaag
caggatgttcccggcgctgtctcagtggaggagatgacggagctgctgagcctacacaag
ctgtgctgtgggaggagctggcacatccagggctgcgacgcccgcagtgggatgggcctc
cacgagggtttggactggctctccaggcagctggttgctgctggtgtcctggacgtagcc
taa
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