Paenibacillus polymyxa SC2: PPSC2_00720
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Entry
PPSC2_00720 CDS
T01335
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm03030
DNA replication
ppm03430
Mismatch repair
ppm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPSC2_00720 (dnaX)
03430 Mismatch repair
PPSC2_00720 (dnaX)
03440 Homologous recombination
PPSC2_00720 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppm03032
]
PPSC2_00720 (dnaX)
03400 DNA repair and recombination proteins [BR:
ppm03400
]
PPSC2_00720 (dnaX)
Enzymes [BR:
ppm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPSC2_00720 (dnaX)
DNA replication proteins [BR:
ppm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPSC2_00720 (dnaX)
DNA repair and recombination proteins [BR:
ppm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPSC2_00720 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
RuvB_N
DnaX_C
AAA_30
TIP49
AAA_5
AAA_16
AAA_22
AAA_19
RCF1-5-like_lid
AAA_7
AAA_14
AAA_2
Rad17
PIF1
AAA_assoc_2
nSTAND3
AAA_28
Mg_chelatase
AAA_24
End3
RNA_helicase
DUF815
AAA_18
AAA_6
Motif
Other DBs
NCBI-ProteinID:
ADO54138
UniProt:
E3EGB0
LinkDB
All DBs
Position
177478..179229
Genome browser
AA seq
583 aa
AA seq
DB search
MEHIALYRAWRPQAFKDMVGQQHIIQTLQNAIRENRTSHAYLFSGPRGTGKTSAAKILAK
AINCEHGPAPEPCNECEACKRITAGAVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRH
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRIPATIISRCQRFDFRRVSL
EEQTERLDLICQQENIQADLDALQYIARLSDGGMRDAVSVLDQISSFTDGRVTYQQVLDM
TGGIASEQFGKLALALLKEDVGTVLQLIENFMQEGKSADKCMENLLYYFRDLLMIKMVPQ
ATKMTERVLNPEQFREVADAFTKEQLFAMIDTLNRYQGEMKYAVQPQTLFEVALLKLCSI
PGEAGTAAQPTAQRSGAVAGQEDVAMLKRQLAELEKKLERAMQGGLAVGAGQETPSGGRQ
ASGGRAPAPRLSAPAKLPSQLDRYIAEKSSEAFAAVGRKWSQILQGVKEAKVTVHAWFMD
GEPVSVLEDSVLVAFKNNIHRETTEKPANKQVIEKVLHEQLGHPYRLVTMMQKDWNAAIE
GVSDQPAEELQLEPEHDAPGKSKEPWIDEAIQLFGEDLVVIKE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttggaacatatagcgttgtaccgtgcttggcggccgcaggctttcaaggacatggtagga
caacagcatattatccagacattgcagaatgccatccgcgaaaatcgcacgtcccatgcc
tacctgttcagtggtccgcgaggaacgggtaagaccagtgcggccaaaattttggccaag
gcaatcaactgtgagcatggacctgcgccggaaccttgcaacgaatgcgaagcctgtaaa
cggatcacggccggagcggtcatggatgtacaggagattgacgcagcctccaaccggggc
gttgaagagattcgtgatttgcgcgataaagtcaaatatgcgcccacagaagtgcggcac
aaggtttatatcattgatgaagtgcacatgctgacgacggaagcgttcaatgcgctgctc
aagacgctggaagagccgccgccacacgtaatgtttatattggctacgacagagccgcat
cggattcccgcgacaattatttcgcgttgccagcgttttgacttccggcgagtatcgctg
gaggagcagacagagcggcttgacctgatatgccaacaggagaacatccaagctgatttg
gatgcactgcaatatattgcacgtctttcagatggcgggatgcgagatgcggttagtgtt
ttggatcagatatcctcgtttactgatggccgggttacgtatcagcaggtgctggatatg
acgggtgggatcgcatccgagcaattcggtaaattggccttggcattactgaaagaagat
gtaggcacagtgctccaattgatcgagaactttatgcaggaagggaaaagtgcagataag
tgtatggagaatcttctgtactatttccgagacctgctaatgatcaagatggtgccgcag
gcgaccaaaatgacggagcgagtgctgaatccggagcagtttagggaagtggcggatgct
tttaccaaggagcagctctttgcaatgattgacacccttaatcgttatcagggcgagatg
aaatatgcggttcagccccaaactttatttgaggtagctctattgaagttatgcagcatt
ccgggggaagcaggaactgctgctcagccgactgcacagcgctctggtgctgtagctggc
caggaagatgtggctatgttaaagcgccagcttgctgagctggaaaagaagctggaacgt
gcaatgcaaggtggcttggctgttggggcgggtcaggagacaccgtcaggcggccgtcag
gcttctggtggtcgtgcccctgctccacgtctttcagcgccggctaaactcccgtctcag
ttggatcgctatattgctgagaagtcaagcgaagcattcgcagcggtggggcgtaagtgg
agccagattttgcaaggggtaaaagaggcgaaagttacggttcatgcttggtttatggat
ggtgagccggtttctgtgttagaggacagtgtactggtcgcgtttaagaacaacattcat
cgtgaaactaccgaaaaacctgccaataagcaggtcatcgagaaggttttacatgagcag
ttggggcatccttatcgtttggtaacgatgatgcaaaaggattggaatgctgcgattgaa
ggagtttctgaccaacctgccgaagaattgcaactggagccggagcatgatgcgccggga
aagtccaaggagccctggattgatgaagcgattcagcttttcggggaagatctggtagtc
attaaagaataa
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