Paenibacillus polymyxa SC2: PPSC2_02175
Help
Entry
PPSC2_02175 CDS
T01335
Symbol
oppD1
Name
(GenBank) peptide ABC transporter ATPase
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPSC2_02175 (oppD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppm02000
]
PPSC2_02175 (oppD1)
Transporters [BR:
ppm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PPSC2_02175 (oppD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
NB-ARC
nSTAND1
ABC_ATPase
AAA_16
RsgA_GTPase
NACHT
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADO54403
UniProt:
E3ED46
LinkDB
All DBs
Position
490383..491414
Genome browser
AA seq
343 aa
AA seq
DB search
MNIKPVLEIKGLSVSFRIKDQYHPAVDHLDLTVNPNEVLAVVGESGCGKSALALSIPQLH
DMERTRVEGKVLFKGTDLIRLSSGQMNKIRGAGIGMIFQDPLTALNPLMCIGKQIEENLD
YHTSLSTKQKRERVLELLESVDIPNPVRVYEQYPHELSGGMRQRVMIAIAIACRPSLIIA
DEPTTALDVTIQSQILDLLKQLQQETGSGIILITHDLGVVAEVADRVVVMYAGEIVESAD
VFELFRHPQHPYTRSLLASMPGSHTKGEPLHVIGGIVPSLQDIPRNSCRFASRIPWIQQR
MHEDHPRLSEISPGHWVRCTCYQHFHFEDETKGEAAHGTTRDK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatcaaacccgtgttggagattaagggattatccgtatcttttcgcatcaaggat
caatatcaccccgcagtcgaccatctggatctgacggtcaatcccaatgaagtgctggct
gtagtcggagaatccggttgtggcaaaagcgcgctggcgctttcgatcccacaactgcat
gacatggagcgaacacgtgtcgaaggaaaggttctttttaaaggcacggatctgatccgt
ctctcctcagggcaaatgaataaaatccgcggagcgggcattggcatgatctttcaggac
ccgctgacagcacttaacccgttaatgtgcattggtaagcagatcgaggaaaatctcgat
tatcatacgtccctatctacgaagcaaaaaagggaacgtgtactggagctactggaaagc
gtggatatacccaaccccgtacgtgtgtatgaacagtatccgcatgaactttcaggaggg
atgcgccagcgtgtgatgatcgcgattgccatagcttgccgaccctctcttattattgca
gatgagccgacgactgcgctcgatgtaaccattcaatcgcaaattcttgacttgctcaaa
cagcttcaacaggagaccggaagcggaattattctgattacgcacgatcttggcgttgtg
gccgaagtagccgaccgtgtggtggtcatgtatgccggagaaatcgtggaaagcgcagat
gtttttgaattatttcggcatccacagcatccgtatacgcgttccttgctagcctccatg
ccgggatcgcataccaagggagaaccgctgcatgtcatcggtggtattgttccctcattg
caagatattcctcgcaatagctgtcgctttgcttcgcgtattccttggattcagcagaga
atgcatgaagaccatccccgattaagtgaaatttctcccggccattgggtccgctgtaca
tgttaccagcattttcattttgaagatgagacaaagggagaggctgctcatggcactact
agagataaatga
DBGET
integrated database retrieval system