Paenibacillus polymyxa SC2: PPSC2_03320
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Entry
PPSC2_03320 CDS
T01335
Symbol
ybbB1
Name
(GenBank) Fe3+-citrate ABC transporter substrate-binding protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
ppm
Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppm03000
]
PPSC2_03320 (ybbB1)
Transcription factors [BR:
ppm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PPSC2_03320 (ybbB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
Peripla_BP_2
HTH_AraC
DUF6262
Motif
Other DBs
NCBI-ProteinID:
ADO54636
UniProt:
E3EGJ7
LinkDB
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Position
738585..740252
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AA seq
555 aa
AA seq
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MNLAPLYIRLQHYDRFQVDQIIPANGHNEGMNDNETKLCTLLIALSHGIRLYVDNIAIDL
RQGSCILVLPVQRYTMESSNKEAQLARFTFETFKVEGMTLNPVAHPPLLCGYPYNLLISQ
VNRVLGNEAWTSNQCCSYLSTSEMAMMQGRLQLILGLMAQFDEQVSQLQNNEKINLVQQT
VQYMEQHYDEDLTVEKLANMAGMVRWQYSQKFKIMTGKKPNDYLVQLRINHAKRLLCNST
ETLGKISRKIGFKDEYYFSRCFHKLTGHTPREYENIHLRTGQKTVIDSFGRKIHIPKDTT
RIVTDGKFTLGELLVLAMPPIGAAISIMKDNVIYHNKLRNIHNIGHWADPDKIAQLQPEL
LLLSYVHPEQDLQKLDAIAPTVILNSKFRLFERLRYIAKLVERSKAAEKWITRYENKVRW
VRRQLADAYVAGETATVYLKFGAKLYIMGQSGLAATLYESLGFRPSANVMHLIEQGQAWI
EIQQHQMNHYAGDRNFVLASRQELQTVAHCPHIAALADLSSSKTHFVDSIWNYDDPITRG
QLLEVLPYIFNKKIK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagcacccctgtatattaggctgcaacactatgataggtttcaagttgaccag
ataattccagcgaacggccacaatgaggggatgaatgacaatgaaacaaaattatgcaca
ttattgatagcactcagtcacggcatacggctgtatgtagacaatattgcaatcgatctg
cgacaaggaagctgcattctggttttgcctgtacaacgctacactatggaatcaagtaac
aaagaggcacagcttgcacgctttacctttgaaacctttaaagtagaaggaatgactttg
aatccggttgctcatccacctttgctttgtggttacccctataatctgttgatttctcaa
gtcaatcgagtattaggaaatgaagcatggacaagtaaccaatgttgttcctatctatcc
acatcagaaatggctatgatgcaaggtagacttcagctcattctggggttgatggctcag
ttcgatgagcaagtttcccagttgcagaacaatgaaaagataaacttggttcaacaaacc
gtacagtatatggaacagcattatgatgaggacttaacagttgaaaaacttgctaacatg
gctggaatggtcaggtggcaatatagtcaaaagtttaaaataatgaccggcaaaaagcca
aatgattatttggtccaattacgtataaaccacgcaaaaagacttctgtgtaattccacc
gagacattgggcaaaatatctcgaaaaattgggtttaaggatgaatactatttcagccgg
tgctttcataaattaactggacacaccccgcgtgagtatgagaatattcatcttcgtacc
gggcaaaaaacagttatcgattcatttggcagaaagattcatattcccaaagatacaaca
cgtatcgtgactgatggcaaatttacgcttggagaattacttgttttagccatgccccct
ataggagcggccatctctatcatgaaagataacgtgatttatcacaataagttgcgaaat
attcataatatcgggcattgggcagatccagataaaattgcacaactgcagccggagtta
ttattgcttagctatgttcatcccgaacaagatttgcagaaactagatgcgatcgctcct
actgttatattgaacagtaagtttagactatttgagcggttacggtatattgctaaacta
gttgaacgtagtaaagcggcggagaagtggattaccagatatgagaacaaagtaagatgg
gtacgcaggcaattagcagatgcttatgttgctggggagacagctactgtttatctcaag
tttggtgcaaaactttatattatgggccagagcggattggctgccaccttgtatgaatct
cttggctttcgtccttctgccaatgtgatgcacctaatcgagcaagggcaagcatggata
gaaattcagcagcatcaaatgaaccactatgcgggagaccgtaatttcgtcttggcttct
cgccaggaattgcaaaccgttgctcactgtccacatatcgcggctttagccgatctaagt
agcagtaagactcattttgtggatagtatatggaattatgatgatcccattacacgcgga
cagttgctagaggtgctgccgtatatttttaataagaaaattaagtga
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