Paenibacillus polymyxa SC2: PPSC2_06285
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Entry
PPSC2_06285 CDS
T01335
Symbol
ybbB3
Name
(GenBank) iron-hydroxamate ABC transporter substrate-binding protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
ppm
Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppm03000
]
PPSC2_06285 (ybbB3)
Transcription factors [BR:
ppm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PPSC2_06285 (ybbB3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
Peripla_BP_2
HTH_AraC
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
ADO55287
UniProt:
E3EIH4
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All DBs
Position
complement(1452160..1453881)
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AA seq
573 aa
AA seq
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MNQPSSSVNAPPPNSLLFHFKEIVLASESSDGLTSRPSSDHCLLMFIGGAGKVDIGQEQY
VFHSGHGYWLTPGESYRIAPLEGTVSEYYKITFRVIAMSLEAQSDMTLAENATGMPSIYL
GSVLPEPREYVISSSSKPIQLAEELFYSTQQTIQPHSQTSALRQQIMFQELLLLWQEAHV
PIKHSDDSNLTLPASVESTLTYMEKHYEKPITVKQLAEQANVSIWQYSQLFRKITGKKPL
HYLTELRLTHAKRLLLECKRPLREIARQVGFSDEYYFNRRFRQMTGVPPGQYALSAPGSM
CVKDWTGHQIHIPRQASRIIYHGETMGDLLALGAKAIGGSLRLSESSVYKHRLGNVTDVG
LPLDTRLISALDPDLIIIANSDEQEYERVASIAPTVTFNSFAALEERLRTLGAWLGKERE
AERWLATFAARNLAMWNQLSAHITAGETASVFIFDHGDRLFVMGMSGFSSALYHPHGFQP
AEPIRKVLDEGLGFAEIDPNELPDYAGDRIFMLVPTAPDSKQPLEYMLNSPLWLSLPAVR
QGRVYFVEADRWNWSDAMTRQKLLTALPKLLIH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagccttcttcgtctgtaaatgcacccccgcccaactcactgctttttcatttt
aaggaaattgtgttggctagtgagtccagtgatggactaacatctcgtccaagttcagat
cactgtctgcttatgttcatcggcggggctggaaaggtggatattggtcaagaacaatat
gtattccattcaggtcatgggtattggttaactcctggggaatcctatcgaatcgctccc
ttggagggaactgtttctgaatactacaaaatcacgttcagagtcattgctatgtcgttg
gaggcacaatcagacatgaccttggctgaaaacgcaacgggcatgccatccatttatctt
ggctccgtcctgccagaaccgcgtgaatacgtcatttcctcttcctccaagcctattcag
ttggctgaagagctattttatagcacccaacaaacaatacagccgcatagccaaacctct
gcattgcgtcagcaaatcatgtttcaagagctgctcttgctgtggcaggaagcccacgtc
cctattaagcatagcgatgactctaatctgacattgcccgcatcggtggaaagcaccctt
acatatatggaaaaacactacgaaaagcccattaccgtcaagcagcttgccgaacaggcg
aacgtttccatatggcaatactcccagttgtttcgcaaaataacgggcaaaaagccgctg
cattacctcactgagctgcgcctgactcatgccaagcggctgctgctggaatgcaaacgg
cctttacgtgaaattgcccgtcaggtgggtttctctgacgaatattattttaatcggcgt
tttagacaaatgaccggggttccccctggccaatatgcgctatccgctcccggttctatg
tgcgttaaggattggacaggccaccaaattcatatcccgcgccaagcgagccgtatcatc
tatcatggagaaacgatgggcgatctgctcgcgttaggagccaaagccatcggcggaagt
ctgcggcttagtgaatccagcgtctataaacatcgtcttgggaacgtgactgatgtagga
cttccgctagatacccgcttgatcagcgctcttgatcctgatctgattatcatcgccaac
tcggatgaacaggaatatgagcgcgttgcaagcatcgcgcccaccgtcacctttaactcc
tttgccgccctggaggaacggctgcgtacacttggcgcctggctcggtaaggaacgagag
gccgaacgctggttagctacctttgccgctcgtaatctggcaatgtggaaccaactcagt
gcgcatatcacagccggagaaaccgcctctgtctttattttcgatcatggcgatcggctc
tttgtcatgggcatgtccggattctcatcggccctctaccacccgcacggcttccaaccc
gcagagccaatccgtaaggtgcttgacgagggactaggcttcgcagaaattgatccgaat
gaattgcctgattacgccggagaccgcatttttatgctcgtccctacagcaccagactcc
aagcaaccgctggaatacatgctcaacagccctctctggctcagcctccctgctgtacgt
caaggccgggtatatttcgtagaagcagaccgctggaactggagcgatgccatgactcgg
caaaagctgctcactgcactgcccaaactgctcattcattga
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