Paenibacillus polymyxa SC2: PPSC2_09030
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Entry
PPSC2_09030 CDS
T01335
Symbol
polC1
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm03030
DNA replication
ppm03430
Mismatch repair
ppm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPSC2_09030 (polC1)
03430 Mismatch repair
PPSC2_09030 (polC1)
03440 Homologous recombination
PPSC2_09030 (polC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppm03032
]
PPSC2_09030 (polC1)
03400 DNA repair and recombination proteins [BR:
ppm03400
]
PPSC2_09030 (polC1)
Enzymes [BR:
ppm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPSC2_09030 (polC1)
DNA replication proteins [BR:
ppm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPSC2_09030 (polC1)
DNA repair and recombination proteins [BR:
ppm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPSC2_09030 (polC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADO55884
UniProt:
E3EH93
LinkDB
All DBs
Position
1990113..1990850
Genome browser
AA seq
245 aa
AA seq
DB search
MKEPAQGGGFWSALRRGGVPSAIASVMGAPTAQQMAFIRSLTREQRRSEVLRTPLDRLET
VVFDLETTGFSAQHGDEILSFGAIRVVGDVIMEKEQFYTLVNPRTEIPEQITRLTGITRE
MTDGAPPLMNGLHDFMSFVGGRVLVAHASAHDKAFLNAALWKTSKVQLTHRVLDTMMLAK
WLEPQQHQTYSLDELLAYQSIPIEGRHHALEDAKMTAKLWVAYVQEMLKRNVTNLADVYA
HLSHA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccagcgcagggaggtggcttctggagtgccctccgcagaggaggagtgccg
tcggcaatcgcatctgtaatgggggctcctacggctcagcagatggcgtttattcggtcc
ttaacgcgggaacaacggcgttctgaagtattgcgtaccccactggaccgtttggagacg
gtagtttttgatctggagacaacgggattttcggcacagcatggagatgagattttatcg
ttcggagcgattcgagtagtcggggatgtgattatggaaaaagagcagttttatacgctt
gtcaatccgcggaccgagattcctgaacagattactcggctaactgggattacccgggaa
atgacggatggagctccgccgcttatgaatggactgcatgactttatgtcctttgtaggt
gggcgggtgcttgtagcgcatgctagcgctcatgataaggcctttttaaatgctgcgtta
tggaaaacatctaaagttcagttaactcaccgtgtactagacacaatgatgctcgccaaa
tggctggagccacagcaacatcaaacctatagtttggatgaattgctggcctatcaatcc
attccgattgaagggcggcatcatgcgttagaggatgcgaagatgacggctaagctttgg
gtggcgtatgttcaggaaatgctgaagcgtaatgtgaccaatttggcagatgtctacgcg
catttgagtcatgcctga
DBGET
integrated database retrieval system
