Paenibacillus polymyxa SC2: PPSC2_11225
Help
Entry
PPSC2_11225 CDS
T01335
Symbol
xynX5
Name
(GenBank) autotransporter adhesin
Organism
ppm
Paenibacillus polymyxa SC2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Cadherin_5
Big_9
Cadherin_4
CBM96
Big_2
CshA_repeat
HL_N-beta
LntA_helical
BTB_3
TGFb_propeptide
Motif
Other DBs
NCBI-ProteinID:
ADO56361
UniProt:
E3EJ74
LinkDB
All DBs
Position
2470990..2474274
Genome browser
AA seq
1094 aa
AA seq
DB search
MHFCKSTKRFTYALTAVSLIFSSAISVADAGAAPTAQPKLIQDGTWSKSDTWMDAPENYV
GRSSDTVLGYYRSAIQFEMPELTGKVVTKATLRIHISSIGYSYNLNPFLTVYGSTADVWS
NGAFPLNPTDQPLNTKTGSDLQVGWVDFDVTHFVQQQTDDIVSFALLANEEGNPGDYSEI
TYSADDNGVDIPQLILETAALPAVSKMPEVAAVTTEEDIPTSNITITSNPQDSTVVTHYQ
VMNIIGGKLYHSDGVTELFDGTFITAAEASDGVRFVPMANANNAAGDTFSFDVKAAQSAT
GDGLSDATRAVVHVTEVNDAPTAQDQTLSSISEDSGERTIPFAELLAHASAGPNENGQHL
TISSVSSIAGGAVRLDGTNVIFTPQPDFNGTASFSFTVTDDGTSDGVSVPQSVVKQAFFG
VNSVADVPNVTDALTEEDKQSFDGLILTRNQVDGTDVSYFRISNIIGGTLYKNDGVMEIR
DGQFISVADGEAGLKFTPNLYANSPSGDHFSFDVQSSLDMAGTGISEPNQARITVSEVNN
SPIAVNDTLPSLSANAGAQSIAVDELLANDTAGPVNESLQHLSIASVENAQGGTVVLDGS
VVLFTPNLDYQGPASFDYTVIDNGTTNGALDVKNSTATASFSINSVPTPDPVPTPDPVPT
PDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVPTPDPVQT
DDNYTELRASIKNRKMLVGGTERATASVVKSDSSEIDVSEKATWTSSNTNVATVNQGEIR
ALSEGNTVISATYSGYSFNVPITVTAVTAPAPNNAGSDSSSSSGSGSGHRNSDHSSDDSS
SNTATSAVSSSSVTVSKEPVAVPEELVTEPTVPVQDIFNSNVVVADNKVLQNIKSKAESA
LNSSTNVKPSDLQGHWAEKTVDTFSKLGIVNGYKDGSFRPDGEITRAEFSTIISRIFDIS
VGNQPVVLNDIGDHWAQDAITKLTTAGVLNGYEDGTFRPDQTIVRQEMAAILARILDLDR
LKKDTSNEKSFTDLSTSFAADTIKQLAQAGVLSGISTSQFGPKYHASRAEALTAIYNALS
LNSEIKTVLESLEQ
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttgcaagtctactaaacgattcacatatgcattgacagcagtatcactaatc
ttctcatcggccatctcggtggcagatgctggtgcggcaccaaccgcacaacccaaatta
atccaagacggaacatggagcaagtctgacacttggatggatgctccagaaaactatgtt
ggcaggtcttcggacacagtgttaggatattaccgatcagcgattcagtttgaaatgccc
gagctgactggtaaggttgtaacgaaggcaaccttgcgtattcatatctcttccatcggc
tatagctataacttgaatccttttttgaccgtgtatggatcgactgccgatgtttggagc
aacggagcttttccactgaacccgacggatcagcctttgaatacgaaaacaggctcagac
cttcaagtaggctgggttgattttgatgttacccattttgtacaacaacagacggatgat
attgtctcctttgcattgcttgccaatgaagaagggaaccctggagactattcggaaatt
acatattcagccgatgacaacggcgtagatattccccagttgatattggaaacagcagcc
ctgcccgctgtatccaaaatgcctgaggtagctgctgtaactactgaggaagatatccca
acatccaatataaccattacatcaaacccgcaagattcaacggtagtgacacattatcaa
gttatgaacattatcgggggcaagctgtatcatagtgatggggtaacggagctttttgat
ggaacttttatcacggcagcagaagccagcgatggcgtgaggtttgtgcctatggcaaac
gccaacaatgcagcgggagataccttctcgttcgatgtaaaggcggctcagagtgcaacg
ggggatggactaagcgatgctactagggctgttgttcatgttacggaagtaaacgatgct
ccgacagctcaagaccaaacgctatcctccatttcagaagactcaggagagcggaccatc
ccttttgcagaactgcttgcgcatgcgtctgctggtccgaatgagaatggtcaacatcta
acgatatcctcagtcagcagcattgcaggaggggctgtacgtttggatggaaccaatgtg
atttttacacctcagccggatttcaatggaaccgctagcttctcttttaccgtcaccgat
gatggaacatcggacggcgtctcagtcccgcagtcggtggtcaagcaagccttctttggg
gtcaattctgtcgctgatgtccctaatgtgacagatgctttgacagaggaagacaagcaa
agctttgacggactgatccttactcgtaatcaagtggatggaactgacgtgtcgtacttt
agaatctcaaacattattggtggaaccctctataaaaacgatggggtaatggaaatccga
gatggtcaattcatttctgtagcggatggcgaagcagggcttaaatttacgccaaatctt
tatgctaactctccatcaggtgatcatttcagtttcgacgtacaatcatcgctagatatg
gctggaacagggatcagcgagccgaaccaagccagaatcactgtaagtgaggtaaacaac
agtccgatagctgtgaatgatacactgccatcgttatcggcaaatgcaggagcacaatct
atcgctgttgatgaactcttagcgaacgacacggcaggacctgtgaatgagagcttacaa
catcttagcatcgcatcggtagaaaatgcgcaaggtgggacggtagttctagacggatcg
gttgtgttattcactccgaatttagactaccagggcccggcaagttttgattatactgtg
attgataacggcacaaccaacggagcattagatgtgaagaactcgacagctaccgcttca
ttctctatcaactcagtaccaacgccagacccggtgccaacgccagatccagtgccaaca
ccagatccagtgccaacgccagatccagtgccaacgccagatccagtgccaacgccagat
ccagtgccaacgccagatccagtgccaacgccagatccggtaccaacaccagatccagtg
ccaacgccagatccagtgccaacgccagatcctgtaccaacaccagatccggtacaaaca
gatgacaattacacagaattgcgtgcttctatcaaaaatagaaaaatgctagtagggggt
acagaacgggctacagcaagcgttgtaaaatcagattcgtcagagattgatgtcagtgaa
aaagcaacttggacttccagcaatacgaatgtcgctacggttaatcagggagagattaga
gcactttcagaagggaacacggtaatttccgccacatacagcggatatagctttaacgtt
ccaattaccgtaacagctgttactgctcccgcacccaataatgctggcagtgattccagt
agttccagcggtagcgggtctggccatcgaaacagtgaccattctagcgatgattccagc
agcaatacggcaacatcagctgtatcatcttcatcggtaactgtatctaaagaaccagta
gctgtacctgaagaactggtgactgaaccaactgttcctgtgcaagacatattcaacagt
aacgtagtggttgcagacaacaaagtactgcagaatataaaatctaaagcagaatctgct
ttaaattcttctactaatgttaaaccgtcagacctacaaggacattgggcagaaaagacg
gtcgacacgttttcaaagctgggtatcgtaaatggatataaggatggcagtttcagacct
gatggtgaaattacccgtgcagagttttctactatcatctctagaatcttcgatattagt
gttggaaaccagcctgtggttttgaacgatattggggatcactgggcgcaggatgccata
acaaaactgaccacagcaggagtattaaacggttatgaggacggtacatttagaccagac
caaacgatcgttcgtcaagaaatggctgccattttggcgcggatcttggatttagaccga
ttgaaaaaggacacctcgaatgaaaaaagcttcaccgacctgtccacttcttttgcggct
gatacgattaaacaattagcacaagctggtgtgctttcgggtataagtacgagtcagttt
ggacctaagtatcatgcgtcacgtgctgaagccttgactgcgatttataatgcacttagt
ttgaacagcgaaattaaaaccgtattggaaagtttggagcagtaa
DBGET
integrated database retrieval system
