Paenibacillus polymyxa SC2: PPSC2_13680
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Entry
PPSC2_13680 CDS
T01335
Symbol
nfo3
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPSC2_13680 (nfo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppm03400
]
PPSC2_13680 (nfo3)
Enzymes [BR:
ppm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PPSC2_13680 (nfo3)
DNA repair and recombination proteins [BR:
ppm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PPSC2_13680 (nfo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADO56881
UniProt:
E3E4I2
LinkDB
All DBs
Position
complement(3100128..3100973)
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AA seq
281 aa
AA seq
DB search
MPKLLIGSHVSTRGGFSKAAIRAREQGGRSFQYFPKNPRSLKLKEWSSIDAAACKTYCSE
HQLQSIAHSPYPVNPAHGRERGQELYELMVASLRNDLDIAEACGSKGIVVHFGHMHSSDP
LEGYRNIINCLNDVLEGWQGNAKILIENQAGDHGPMGTTLEEMVQIRQLCRDPGSIGFCL
DTCHAYAAGLWNGGMDEALLEKGDRLGYWPALCGVHLNDSKYPYGSKKDRHARVGQGYIG
TEGMRWITEQEAVRGIPVVLESEAGPDGTHQEDIQMIQSWE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaattgcttatcggctctcacgtgagtacgcgtggtggcttttccaaagctgct
atacgtgcacgagagcagggaggacgttcatttcaatattttccgaaaaatcctcgtagt
ctcaagctgaaggaatggagttccatagatgctgctgcttgtaaaacctactgctcagag
caccaacttcaatctattgctcattcgccatatcccgtgaatccagctcatggtcgcgaa
cgcggtcaggaactttatgaactgatggttgcttcattacgcaatgatctggatattgct
gaagcctgtggatcgaaggggatagttgtccattttgggcatatgcattcgtctgacccg
ctggagggctatcgtaatattattaactgtctgaatgatgtgctggaaggctggcaggga
aatgctaaaatattaattgagaatcaggctggggatcacggtcccatgggaaccacgctg
gaggaaatggttcaaattcgccagttgtgtcgagatcctggcagcatcggattttgcctg
gatacttgtcatgcgtatgcagcaggattgtggaacggtggaatggacgaggctttgctt
gaaaaaggggaccgtctcggctattggccagcactgtgcggagttcatttgaatgattcc
aaatacccgtacggctctaaaaaagacagacatgcgcgcgtggggcaaggttacattggt
actgagggcatgcgctggataacagaacaagaagctgtaagaggtattcccgtcgtattg
gagagtgaggcgggacctgatgggacacatcaggaggacattcaaatgattcaaagctgg
gagtga
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