Paenibacillus polymyxa SC2: PPSC2_15075
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Entry
PPSC2_15075 CDS
T01335
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PPSC2_15075 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppm03400
]
PPSC2_15075 (xseA)
Enzymes [BR:
ppm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PPSC2_15075 (xseA)
DNA repair and recombination proteins [BR:
ppm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PPSC2_15075 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADO57181
UniProt:
E3E868
LinkDB
All DBs
Position
complement(3393088..3394455)
Genome browser
AA seq
455 aa
AA seq
DB search
MAEQQRIYSIKDLNRYIRMKLESDQVLSDVWIRGEISNFTHHSSGHMYFTLKDEGSRIRS
IMFATHNRRLPFVPKEGTRVIARGNVSVYERDGQYQFYATQMQPDGIGSLYLAYEQLKQK
LDAEGLFDTARKRNLPAHPATIGVITSPTGAAVRDIITTLQRRYPQAGIVLYPVLVQGKG
AAPSIVKAIEAMNRMQEVQVMIVGRGGGSLEELWAFNEEAVARAIYASVIPVISAVGHET
DFTIADFVADLRAATPTAAAELAVPHQGELRDQLLQREQRLRNALRQRLEASRERLLRLR
RSPVLLHPRRYMLQHAERMDMLHQRLIRAAANRSRLNAEKNARMRQVLERFNPREQIRSA
RKQTDMAQRQLESAMRAITKTGRQQLHTGIRQLDALSPLKVMARGYSLVYDEQEKRLIKS
LKDVQPGDSIKIKVSDGQLDCQVWGMKEDAKHGGE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaacaacaacgtatttattctataaaggacctgaatcgttatatccggatgaaa
ctggaatccgatcaggtgctgtctgatgtatggatacgcggggagatttctaactttacg
catcattcgagtggtcacatgtactttacgctcaaggatgaggggagccggatacgttcg
attatgtttgcgacccataatagacggctccctttcgtacccaaagaaggtacgcgtgtt
atcgcccggggaaacgtatccgtgtatgaacgggatggacaatatcaattttatgcgacg
caaatgcagcctgacggtataggcagcctttatttggcttatgaacaactcaaacaaaag
cttgatgcagaagggctgtttgataccgctcgcaaacggaatctgcccgctcacccggca
accatcggtgtaattacgtcaccgaccggagcggctgtgcgtgatattatcaccacactt
caacgccgatacccgcaggctggaatcgtgttgtatcctgttcttgtgcaaggaaagggt
gctgccccctcgatcgttaaggcaattgaagccatgaatcgtatgcaggaggttcaggtg
atgatcgtcggacggggcggtggctccttagaagaactgtgggcatttaatgaggaagcg
gttgcgcgtgccatttacgcatcggtcattcctgtcatttcggctgttggacacgaaacg
gattttaccattgccgattttgtggctgacttacgcgcagcgacgccgaccgcagcagct
gagctggctgtgcctcaccagggagagcttcgggatcagctgctccagcgggagcaacgg
ttgcgcaacgcccttaggcagcggctggaagccagtcgtgaacgcttgctgaggcttcgg
cgttcgccagtgctgctgcatccacgccgctacatgctccagcatgcagagcggatggat
atgctgcatcagcgtctgatccgcgcagcagctaaccgttcacgcttaaacgcagagaaa
aatgctcgtatgcgtcaggtactagagcggtttaatccgcgcgaacaaattcgttcggcg
cgcaagcagacggatatggcacaacgtcagctggagtctgcgatgcgtgcgatcacaaaa
acgggacggcagcagctgcataccggaattcgtcagctggatgcgctgagtccgctcaaa
gtcatggcccgaggctacagcttggtatacgatgagcaggagaaacggctgatcaagtcg
ctcaaagatgtacaaccgggagattccatcaagataaaagtgagtgacgggcagttagac
tgtcaagtatggggaatgaaggaggacgcgaagcacggtggcgaatga
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