Paenibacillus polymyxa SC2: PPSC2_15600
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Entry
PPSC2_15600 CDS
T01335
Symbol
pdpF3
Name
(GenBank) carboxypeptidase
KO
K03693
penicillin-binding protein 1B
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm00550
Peptidoglycan biosynthesis
ppm01100
Metabolic pathways
ppm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPSC2_15600 (pdpF3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPSC2_15600 (pdpF3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppm01003
]
PPSC2_15600 (pdpF3)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppm01011
]
PPSC2_15600 (pdpF3)
Glycosyltransferases [BR:
ppm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PPSC2_15600 (pdpF3)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PPSC2_15600 (pdpF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Tissue_fac
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
ADO57289
UniProt:
E3E897
LinkDB
All DBs
Position
3509168..3512191
Genome browser
AA seq
1007 aa
AA seq
DB search
MVEEKNNVSEPKPSRLRRTMRRLGRVIKWVVIIGFMGALFAGGTAAGYIASIVKNEPVRS
RSTILQEVDKNAITGFAYFNDGSPIGQLRTEEDRRPVTFKEIPQLVIDAVIAIEDNHFYE
HKGVDLSGTLRAVKQKALHESVQTGGSTLTQQLARRVFLNLDRTDDRKVKEILLSLRLER
FLSKQQIITAYLNKVPFGNGSSGYNVFGIKAAAKGIFNENDLGKLNVAQAAYLAGLPQLP
SSYSAYNGKGEFNEAGFKRAINRQHLVLSRMLEENKINKAQYDEAMAFDIKKSLAPRTVK
AYNTYPYLMMETERQAAQALMSVTNPSQKANASADTKTKDDNDLLKEAEQQLRTGGYMVY
TTIDKSVYKSMRQIAENKDNFSATSKTKGDEQAAAILIQHKTGAILGMMEGRDFQKEQMN
YATQMVRQPGSAMKPIAAYLPALDSGLVQPGTIVDDAPIILKDGSNGYHIPKNSNNRYQG
LVTARYALNQSLNTIALKLFNEKVGINKAWAFAKKLGITTLEPSDNNAQTGVLGGLAHGV
TVEELTNAYGAIPNGGVFNDAYMIEKIVDSQGNIVYKHQPNPVQAFTPQTAYLMTDMLRT
AVSEGTGKLVRRNFNQSGKIPIAGKTGTTQSYTDVWFEGFTPDVTLGVWVGYKQPVNKLE
TKAQKERARRLWALIMNEVTAKDSQLFQTDSFKRPDGIVSRTASAYGSDIYNSKYLPKNS
ENGVTRAKYITYQGVNYIPRDGTPDDMLYERTVRKREKPISELIKELQQAFTVMRRHNSL
SYYLPQDADKEAPTQIDPRRDDGAAPNAPSSVSVSYSDGKAIISFSPSGNSDVVGYRLYR
STDGGSFERLGKVVMADGSKVFSDSPGGSSASYYVTAVDVGGHESGPSSKADTAPVVPPA
DSESPEAPGEGDETGAQPTEVPTAPEQPQAKAAGTSVVLQWSAGKPADAITGYNVYYSES
GAEPFKNIGSTANTNFEYKPGRKPKGWFRVTSMNTMGESAPSGAVRP
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagaaaaaaacaatgtatcagagccaaagccttcccgcttacggagaaccatg
cgaaggctcggccgtgtcataaagtgggtcgtcatcatcggttttatgggagcactattc
gcaggaggaaccgccgccggctatattgcttctattgtaaaaaacgagcccgtgcgttcc
agatctacgattctacaggaagtagataaaaatgcaattacaggcttcgcttatttcaat
gatggctctcccatcgggcagcttcggaccgaggaagatcgaagacctgttacatttaag
gagattcctcagctcgtcattgacgcagtcattgctattgaagataaccatttttacgag
cataaaggtgtcgatttgtcgggaacgctgcgtgctgtgaagcaaaaggcactacatgaa
tccgtacaaactggagggagtactcttacccagcagcttgcacgtcgtgtctttttaaat
cttgatcgtacggatgaccgcaaggtcaaagaaattttactatctctgcgcctggagcgc
ttcctgagtaagcagcaaataattacagcctatctcaataaggtacctttcggtaacgga
tcaagcggttacaacgtctttggtattaaagcagcggccaaaggtatttttaatgagaat
gatttgggcaagcttaatgtagcccaagctgcctatctggcaggtttgccacaactccct
tcttcttattctgcttacaacggtaaaggcgaatttaatgaagctggttttaaaagagcg
atcaaccgccagcacctggtgctcagccgaatgctggaggagaacaaaatcaataaagca
caatatgatgaagcgatggcttttgatatcaaaaaatctctcgcaccacgcactgttaag
gcttataacacctatccatatcttatgatggaaacagagcggcaagctgcgcaggcactc
atgtctgtcaccaatccgagtcaaaaggctaatgccagtgcggataccaaaaccaaggat
gataacgacttgctcaaagaagccgaacagcagcttcgcacaggcggctatatggtatat
accaccattgataagagcgtgtacaaatctatgcgtcaaattgcagaaaataaggacaac
ttctctgctactagtaaaaccaaaggtgacgagcaagcggcagccattctgattcagcat
aaaaccggcgccattctcggtatgatggaaggtcgggacttccaaaaagagcaaatgaac
tacgctacccagatggtacgccagccgggttcagccatgaaaccgattgctgcttatctg
cctgctttggacagcggtctcgtacagcctggcacgattgtggatgatgcccctattatt
ttgaaggatggcagtaatggatatcacatcccgaaaaattccaacaaccgctaccaagga
ttagtcacagcgcgttatgcactgaatcaatcgctaaatacgatagcactcaagctgttt
aacgaaaaggtagggatcaataaggcgtgggcttttgctaaaaaactgggtattaccacc
ttggaaccaagcgataacaacgcccaaaccggtgtactcggtggcttggcccacggggta
accgttgaggagctcaccaatgcatatggagccatcccaaatggcggtgtgtttaatgat
gcctacatgatcgaaaagatcgtggattcgcaaggcaatattgtatacaagcatcagcct
aatcccgtgcaagccttcacaccacaaactgcctacctgatgacggatatgttacgtaca
gccgtatcggaaggcacaggcaaactggtgagacgtaactttaatcaatccggcaagatt
ccgattgccggtaagacaggcactacgcaatcctacaccgatgtgtggttcgagggcttt
acacctgacgtcacgctgggagtgtgggttggatacaagcaacctgtcaataagcttgaa
acgaaagcacaaaaagagcgggctcgtcgtctatgggctctaatcatgaatgaagtaacg
gctaaagattctcagttattccaaacggatagtttcaagagacctgacggtattgtaagc
cggacagcatccgcttatggttcagacatttataacagtaaatatttacccaaaaacagt
gaaaatggcgttacccgtgcgaaatatattacctatcagggtgtaaattacattccacgt
gatggtacgccagatgatatgttgtatgaacggaccgttagaaaacgggaaaagccaatc
tcagaattgattaaagagcttcagcaagcctttacagtgatgagacggcataattcgttg
tcctactatctgcctcaagatgcagataaagaagctcctactcagattgatccacgcagg
gacgatggggcagctcctaacgctccatctagcgtcagcgtaagctatagcgacggcaag
gccataattagctttagcccaagcggaaacagtgatgttgtaggttaccgtctatatcgt
tctacagatggaggcagcttcgagcggcttggcaaggttgtcatggctgatggctccaag
gtattctccgacagccctggtggaagcagcgcaagttactatgtgaccgccgttgatgtg
ggaggacatgagtctggaccaagcagcaaagcagacacagcacctgtagtaccacctgcg
gattctgagtcaccagaagctccgggcgagggagatgaaacaggtgcgcagcctacagaa
gttcctactgctcctgaacagccccaagctaaagcggcaggcacgtccgtagtgctccaa
tggagtgcaggaaagcctgcggacgctataacaggctataacgtatattacagtgaaagc
ggtgcggagccttttaaaaacataggctctaccgcaaacaccaactttgagtataaacca
ggccgcaagcccaaaggctggttccgtgttacttccatgaataccatgggggaatcggct
ccttctggagccgttcgtccatag
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