Paenibacillus polymyxa SC2: PPSC2_16930
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Entry
PPSC2_16930 CDS
T01335
Symbol
addA
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ppm
Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppm03400
]
PPSC2_16930 (addA)
Enzymes [BR:
ppm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PPSC2_16930 (addA)
DNA repair and recombination proteins [BR:
ppm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PPSC2_16930 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_16
AAA_30
DUF2249
DUF5956
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ADO57576
UniProt:
E3E9E5
LinkDB
All DBs
Position
complement(3830704..3834723)
Genome browser
AA seq
1339 aa
AA seq
DB search
MIGTSNAKGLPKPEGSMWSDDQWRAISESGNNMLVAAAAGSGKTAVLVERIIRKIVDPRL
GFSVDRLLVATFTKAAAAEMRQRIREALERVLEQEPESEHVRRQLSLLNRASITTLHSFC
MEVIRRHYQAIPLDPGFRIMNEHETELLRQELLEELFEEKYEAHDEGSTFRRLVDWFSGE
RTDDAMYVLVQRLYDFSQSHPWPEHWLRETAAAFRVQDVAALGETPWVRSILADAALSLR
GAASLLEQAHETAIQAGGPAPYAMTLQEDAAMVKELLQELETQPWASLYDHFQAASFGKL
KPVKKDQTEPALQERVKTLREAAKKMITDMKASLFGRRAEAYLEELHATAPLMDELVETV
IAFGERFQQHKQSKGLVDFGDLEHYCLKILRHPDSTPYKLLPSDAALEYKAQFDEVLLDE
YQDTNTVQEDIVRLVSREEPGNRFMVGDVKQSIYRFRLAEPGLFLNKYQRYGMQEQEDGF
LIDLARNFRSREEVVDAVNLVFRQIMSVDVAEIEYDERAWLVHGASYPEKTEQEAASAYA
PELLLVDKGGRGLSETLELPEMGDESALQESELAELAELETAQLEARAIAQRIKELTGDT
GQPLLIYDRGLKAMRPAVYGDIVILLRSASVWAPLIVEELRLEGIPASGEQTTGFFKATE
VEVMLSLLHIIDNPQQDIPLASVLRSPIVGLTEDELAQIRLEKPDGLFYDALLAAAETEQ
VDQSVKGTSADVLEMDLFTEDSLSPPHSVHRDDGNTLSARLRSFLRNLDAWRQEARQGSL
SALIWNVLEETGYLDWVGGLPGGSQRQSNLRALYDRARQYETSTSNRGLFRFLTFISRLR
ERGGDLGSISGGTEPDQAVRIMTIHKSKGLEFPVVFIAGTAKMFNQQDLNAPFLMHKELG
FGPKYVEEQNRVSYPTLPNLAIRRRSQLELLAEEMRVLYVALTRPREKLIMTGTVKDLAS
RAAGWARAKEHTETVLPDYILAAGRSYLDWVGPALIRHPSATSLRKAAGDQEGDYHRLEH
MPGADWLFKIVASETLSGSRVNSDREEEVSAEERQKKTEALRNVELIELDEESETDIAAA
LSWTYPYERAGKTAANTSVTEMKRWLEMQEIGSDDWLNLSSISQQADLPEDCENSDTGGS
QLHLRRPKFMGNQRLTPTERGTVYHTLMLHLPLDGVMSAEIIEETKARLLNQRILLDVHA
EALDTDKILRFFSSELGSRMLRSSRIQRELPFTYTMRATDYWNHSLPVMLPEQKTVTEGG
QDDKVLMNGIIDCLFETPEGLVLLDYKTDRVSEYRTLSHLTDQYRFQLELYARVIEEITG
NKVAEKWLYFIEAEESVRL
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgataggcacgtcaaacgctaaaggcttgccgaagccggaaggaagtatgtggagtgat
gatcagtggcgtgccatttcggagtctggtaacaacatgctggtcgcggcagcggcgggt
tctggtaaaacagcagtgctggtagagcgtattattcgcaaaattgtcgatccccggctc
ggcttcagtgtggatcggttactagtggcgacctttacgaaggctgcagccgctgaaatg
cgtcaacggatacgcgaagccctggaacgtgtgctggaacaggaaccggaaagtgaacat
gtgcgccgacagctatcgttgttgaatcgcgcctcaattacgacacttcactctttttgt
atggaggtcatccgcaggcattatcaggccattcctcttgatcccggctttcggattatg
aatgagcatgaaacagaattgctgcgccaagaactattagaagaactgtttgaggagaaa
tatgaggcccatgatgaaggcagcacattccgcagactggtcgactggtttagtggagaa
cgcaccgatgatgccatgtatgtgcttgttcagcggttgtatgatttttcgcaaagtcat
ccttggccggagcattggctgcgggagacggcagcagcatttcgtgtacaggatgtagct
gcgttgggggagactccctgggttcgcagtattttggcggatgctgcactttcgttgcgc
ggagccgcgagtttgctggaacaggcgcatgaaacagctatacaggctggcggtcctgca
ccctatgccatgacgctgcaagaagatgcggcgatggtgaaggaattgctgcaggagctg
gagacacagccgtgggcatccttgtatgatcattttcaggcagcgtcctttggtaagctc
aagccagtcaaaaaagatcaaaccgagcctgcattgcaggaacgggttaagacgctacgc
gaggctgctaagaaaatgattacagatatgaaggcttccctgttcggtaggagagcagaa
gcttatttggaggaactgcatgcgacggctcctctgatggacgaactggtggagaccgtg
attgctttcggggaacgatttcaacagcacaagcagtcaaaaggactggtggatttcggg
gatttggagcattattgtctcaaaatattaagacatcccgactccactccgtacaagctg
ctcccttccgatgctgcacttgaatacaaggcacagttcgacgaggtgttgctggatgag
tatcaagatacgaataccgtacaggaagatatcgttagactggtatcacgcgaggaaccg
ggtaaccgttttatggtgggagacgtgaaacagagtatttatcggtttcgactggccgag
ccagggctgtttttgaataagtatcaacggtacggtatgcaggagcaggaagatggcttt
ttgattgatctggcgcgtaattttcgcagtcgggaggaagttgtcgatgcggttaatttg
gtgttccgccagattatgagtgtggatgtagcggaaattgaatacgatgaacgagcatgg
ctggtgcacggcgcgtcctatcccgagaagacagagcaggaagctgcgtctgcatacgca
cctgagctgctgttagttgataaaggtggacgtggtctttccgagactttggagctacct
gaaatgggggacgaatcggctttacaggaaagtgagctggccgagcttgcggagctcgaa
acggcacagttggaggctcgtgcgatcgcgcaacggattaaggagctgactggagatact
ggacaaccactgttgatttacgataggggattaaaagcgatgcgtccagcagtctacggt
gatattgtcattttgcttcgttcagcaagcgtatgggctcccttaattgtcgaggaactg
cggcttgagggcattccagcctctggagagcagacgacaggcttttttaaggcaacggaa
gttgaagtgatgttgtccctcctgcacattattgataatccgcagcaggacatcccgctt
gcatccgtgcttcgttcgccaattgtcggcttgaccgaagatgaactggcacaaattcgg
ctagagaagccggatggattattttatgatgcattgctggcggcagcagagactgaacaa
gtcgatcagagcgtaaaagggacctctgctgacgtattggagatggatcttttcactgag
gactcgctatctccaccccactctgtccatagggacgacggcaatacgttgtctgcccga
ctacgctcatttttgcgtaatttggacgcatggcggcaggaagccagacaaggcagctta
agtgcattgatttggaatgtgctggaggaaacaggatatctagattgggtgggtggattg
cctggcggctcacagcgtcaaagcaacctacgggccttatatgaccgagcgagacagtat
gagacttctacgtccaaccgtggcttgttccgattcctgacctttatttcccgtctgcgg
gagcggggcggtgatttaggatcgatcagtggggggactgaacccgatcaggctgtccgc
attatgaccattcataaaagtaaaggacttgaatttcctgttgtgtttattgcggggacg
gcaaaaatgtttaatcagcaggatctgaatgcgccgtttctaatgcacaaggagttggga
tttggtcctaaatatgtggaggaacaaaaccgtgtcagctaccctacgctgcctaattta
gcgatccgtcgacgctcacagctggagctgttggctgaagaaatgcgtgtgctatacgta
gcgcttacgcgtccgcgtgaaaagctgattatgaccggaaccgtgaaggatctcgcttcc
cgcgcagcgggttgggcgcgtgccaaggagcatacggaaacagtattaccagactatata
ctggcggcaggtcgcagctatctggactgggtaggtcctgcattgattcggcatccttct
gcaacttcgctgaggaaagcggcaggggatcaggagggggactatcacagactggaacac
atgccgggggcagattggttatttaaaatcgtagcctcagaaacactttctggctctcgt
gtgaactcggatcgtgaagaagaggtatcggccgaagaacgccaaaagaaaactgaagca
ctgagaaatgttgagctaatcgaattagacgaagaaagtgaaacggatattgctgcggct
ctttcttggacctacccgtatgaacgggcgggcaagacagcagccaatacatcggtcaca
gagatgaaaagatggctggagatgcaggagattggatcggacgattggctgaatctatct
tctatctcccaacaagcagacttaccagaagattgtgaaaattctgacactgggggcagt
caattacacttgcgcagacctaagtttatggggaatcagcgactgactcctacggaacga
ggaacggtctatcatacgttgatgctgcatctgcccttagatggagtaatgagcgctgaa
attattgaggaaacaaaggctcgtttgctgaatcaacgcattttactggatgttcatgca
gaggcgctggatacggataaaatattaagatttttctcaagtgagctggggagcagaatg
ttgcgttcatcccgtattcagcgtgagcttccgtttacttataccatgcgggcaaccgat
tactggaatcacagtttacctgtgatgctgccagaacagaagacagttacggaaggcggg
caggacgataaagtgctgatgaacgggatcattgattgtctgttcgaaactcccgaagga
ctggtgctgctggattataaaacagaccgggtctccgaatatcgtacgctgtcacattta
acggaccaatatcgttttcaattggagctgtatgcccgtgtgattgaagagattacaggc
aataaggttgctgagaaatggttgtattttatagaagctgaagagagtgtgcggttgtag
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integrated database retrieval system
