Paenibacillus polymyxa SC2: PPSC2_19905
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Entry
PPSC2_19905 CDS
T01335
Symbol
lysA3
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm00300
Lysine biosynthesis
ppm00470
D-Amino acid metabolism
ppm01100
Metabolic pathways
ppm01110
Biosynthesis of secondary metabolites
ppm01120
Microbial metabolism in diverse environments
ppm01230
Biosynthesis of amino acids
Module
ppm_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPSC2_19905 (lysA3)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPSC2_19905 (lysA3)
Enzymes [BR:
ppm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PPSC2_19905 (lysA3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ADO58205
UniProt:
E3E5Y6
LinkDB
All DBs
Position
complement(4480401..4481678)
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AA seq
425 aa
AA seq
DB search
MDQKDEVLLERFGEHPTPFYYYDGDALHAHVSSLLARLHPAVRVHYALKANGNVPLAGLL
RSLGCGVEIASAGEMFVAMEAGYAAEDVLYAGPGKTIAELREAITCGIGCIHVESVRELR
LLEDIAAQTGVFVRAAVRINPDNDLSGATIKMGGVPRPFGVDEGQLDHFFKVLEDCPHVY
FQGIQVYTGTQMLKADQILASFANTLQLAERVQAQYSVAMHTINLGGGFGVPYFAHEQPL
DMDHVIDGLNALAEQTRSRMPGVRLIIESGRYLVAQSGMYVCRALYTKKSKGEKFVVADG
GMNHYVAATFRGRRLRDNYPVRIMRRQSAEVSTELETVSIVGPLCTPEDCIVKKAELPPI
QEGDYIAFPNAGAYGLSYSPLYFLGHATPAELLDYRGKVHIIREHGDRTDLLHHQRMIAL
PEDVM
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaggacgaagttttactggagcgattcggcgagcatccgacacccttttat
tattatgatggagacgcgctgcatgctcacgtcagctcgttgctggcccggctacacccg
gccgtgcgtgtacattacgcgctcaaggctaatggtaacgtgcccttggctgggttgctg
cgctcgttaggttgcggtgtcgagattgcttcggctggagaaatgttcgtcgccatggag
gccgggtatgctgcggaggacgtactgtacgctggaccggggaaaacaatagctgagctg
cgtgaggcgataacctgtgggatcggctgcattcatgtcgaatcggtgagagagctgcgt
ctactggaggacattgccgcccaaacgggcgtgtttgtcagggctgcggttcgaatcaat
cccgataatgacctgtcgggcgcaaccattaaaatgggcggtgttccgcgcccttttgga
gtcgatgaagggcaactggatcacttttttaaggtgctggaagattgcccgcacgtatat
tttcaaggcattcaagtatatacaggtacgcaaatgctgaaagcggatcagattttagct
tcatttgcgaataccttgcagttggcagaacgggtgcaggctcagtatagtgtggcgatg
catacgatcaatttgggcggcgggtttggtgtaccttattttgcccatgagcagccgctt
gatatggatcacgtcattgatggacttaatgcactcgcggagcagacccgatcccgcatg
ccgggggttaggctgatcatcgaaagcggcaggtatctggtcgctcaatcaggcatgtat
gtctgccgggcgttgtataccaagaaatccaagggagagaagtttgtcgtagctgatggc
ggcatgaaccactatgtcgcagctacctttcggggacgccgtttaagggacaattaccct
gtgcgaattatgcgcagacaatcagcagaggtttctacggagctggagacggtaagcatt
gttggtccgctgtgtacacccgaggattgtatagtgaaaaaagcggagttgcccccgatt
caagagggcgattatattgcttttccgaatgcaggagcctatggattgagctacagccca
ttatattttttgggacatgctactccggcggaactgctcgattatcgcgggaaagtgcat
atcattcgtgaacacggtgatcgcacggaccttctgcatcatcagcgtatgattgcgttg
cctgaggatgtaatgtaa
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