Paenibacillus polymyxa SC2: PPSC2_20780
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Entry
PPSC2_20780 CDS
T01335
Symbol
licR3
Name
(GenBank) PTS fructose transporter subunit IIA
KO
K03491
probable licABCH operon transcriptional regulator
Organism
ppm
Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppm03000
]
PPSC2_20780 (licR3)
Transcription factors [BR:
ppm03000
]
Prokaryotic type
Other transcription factors
BglG family
PPSC2_20780 (licR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRD
PTS_EIIA_2
HTH_11
Mga
HTH_DeoR
HTH_Mga
PuR_N
HTH_10
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ADO58398
UniProt:
E3EAA6
LinkDB
All DBs
Position
4664612..4666558
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AA seq
648 aa
AA seq
DB search
MNARMVSILQHLLAADAPVKSDYLAKLIQVTSRTIRSDIRELDEFLSKHGAAIEPVRSRG
YELKITDNRSFRALLQQLFLSGEPDDPGSPGYRQLYLIKRLLLADHYVKLEDLADELYIS
KSTVQNDFKEVKQTLQGYGITIDKRPNYGVKLKGDEVQLRFCLSEFIVSRSEEQGGTLHA
ALRIVTPHEMTLICGIVLEQTQKYEVTLSDIAFSNLSIHIAIACKRIRDGNQVAMLSTEI
GDLRGTDEFRAAEHIVGLIEKELQLSFPEDEIAYIAMHLAGNKWFVGIEGQQIEDMGPEK
LLDWNIYELGKEMLAEIDRDLNLNISRDMELLIGICLHLKPALNRVKYGMNIRNPMLEHV
KSNYSLAFQAGVIGAKLVESKLNIAIPEAEMGYLAIHIGAAIERQRMNTRPKRCLVVCTS
GVGSARLLKYKLQSTFGSSLEVAGTTEYYKLQQVPLHDIDFVVSTIPIQLPLSVPVVVVQ
TLLGGSDMDKIGSLLAGEAEFDFHYIREELVFLRQNFTTKEEVISFLGQKIYAEGLIRSA
EGFIGLVLEREQAAPTAYGNLVAVPHPIIPQSNQTVWAVCTLQQPIEWGDKPVQFICLLS
IERNGKEPPSKMYNHLMELVDNSDIVQQMLKCETYEEFSRIIVKYKLY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacgcatggtttcaattcttcagcacttgctggctgccgatgctcctgtcaaa
agtgattatctcgccaaattgattcaggttacttcacgtaccatccgcagcgatatccgg
gaactggatgaatttctatccaagcacggggcagcaattgaacctgttcgttcaagggga
tatgaactaaaaattacggataatcgtagctttcgtgcgctgctgcagcagttgttcctg
tccggcgagcccgatgatccaggttctcccggctaccggcaattgtatttaatcaagcgt
ctcctgctcgctgatcattatgtgaagctggaagacctggcagatgagctatatataagc
aagtctacggtgcagaatgatttcaaagaggtcaaacaaaccctacaaggctacggaatc
accattgacaaacggccaaattacggagtcaaactgaagggtgatgaagttcagcttcgg
ttttgcttgtccgagtttattgtaagtcgttccgaagaacaaggcggaacacttcatgca
gcgctgcgcatcgtcaccccacacgaaatgacgctgatttgcggaatcgttctggaacaa
actcagaaatatgaagtaacgctctccgatatcgcgttcagcaatttatctattcatatt
gcaatcgcctgcaagcgtattcgtgacggaaaccaggtagctatgctctcgacggaaata
ggagatctgcggggcaccgacgaatttcgggctgccgagcatattgtcgggctgatcgaa
aaggaattgcagttgtcttttcccgaagatgaaatcgcctacattgccatgcatcttgcc
ggaaacaagtggtttgtcggaattgaaggacaacaaatagaggacatgggacccgagaag
ctgctggactggaacatctatgaattgggcaaggaaatgctcgccgagatcgacagggat
ttgaatctgaacatcagccgtgatatggaactgctcataggcatctgccttcatctgaag
ccggcgctgaaccgggtaaagtatgggatgaacatccgaaaccccatgctggagcatgtc
aagagcaactactctctggcttttcaagcgggagtcattggtgccaagctggtcgagagc
aagctgaatattgcgatcccggaagcggagatgggctatctcgccattcacatcggagca
gccatcgaacgacagcgtatgaacacccggccaaaacgctgtctggtcgtctgcacttca
ggagttggaagcgcccggctgctcaagtacaaactgcaaagcacttttggcagctcgctt
gaagtggcgggtacaacggaatattacaagcttcagcaggtccccctccatgacattgac
tttgtggtgagcaccattcccattcagctgccattatcggttccggtcgtggtcgtgcag
acacttcttggcggcagcgatatggataaaattgggagtttgctggctggtgaagccgag
tttgattttcactacattcgggaggaactcgtatttctgagacaaaattttaccaccaag
gaagaggtcatctcttttctgggccaaaaaatatatgctgaagggctgatccgctctgca
gaaggttttataggactcgttctggaacgagaacaggctgcacccacggcttacggaaat
ttggtagccgttcctcaccctatcattccgcaaagcaatcaaaccgtatgggcggtctgt
acccttcaacaacctatcgagtggggcgacaaaccagtgcagttcatctgtctcctcagc
attgaaagaaacggtaaagagccaccgtctaaaatgtataaccatctcatggaactggtc
gacaattcggatatcgtccagcagatgttaaaatgcgaaacgtacgaggaattctccagg
attatcgttaaatataagctgtattga
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