Paenibacillus polymyxa SC2: PPSC2_22295
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Entry
PPSC2_22295 CDS
T01335
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PPSC2_22295 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppm03021
]
PPSC2_22295 (rpoA)
03400 DNA repair and recombination proteins [BR:
ppm03400
]
PPSC2_22295 (rpoA)
Enzymes [BR:
ppm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PPSC2_22295 (rpoA)
Transcription machinery [BR:
ppm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PPSC2_22295 (rpoA)
DNA repair and recombination proteins [BR:
ppm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PPSC2_22295 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
PASTA
RAD51D_N
OPA3
Motif
Other DBs
NCBI-ProteinID:
ADO58690
UniProt:
E3E6Y8
LinkDB
All DBs
Position
complement(5007571..5008515)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVDVNDDGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFATVPGVKEDVTEIILNLKALSLKIHSDEEKVLEIDAEGEGVVTAGDIRADSDVEI
LNPDLHIATLGPGSRLHMRIFANRGRGYVKQDRNKRDDQPIGVIPVDSIYTPIARVNYGV
ENTRVGQVTNYDKLTLEVWTDGTIRPEEAVSLGAKILTEHVMLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKSEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaaaattgagacggttgacgtcaatgatgatggcacctat
ggaaaattcgtagtagaaccgctggaacgcggatacggtacgacgcttgggaactcgctt
cgccgtattctgttatcctcgttaccgggggcagcagtcacatcggttcagatcgatggg
gttctgcacgagtttgcaacggttcccggtgtgaaggaagacgtaacggagatcattctg
aacttgaaagctttatcgcttaaaatccactcagatgaagagaaagtactcgaaatcgat
gcggaaggcgaaggagttgtaacggcaggtgatatccgtgcggatagtgatgtggaaatt
cttaatccggatcttcacattgcaacgctcggaccgggttcgagacttcacatgcgtatt
tttgccaatcgcggtcgcggttacgttaagcaggatcggaataaacgtgatgaccagccg
atcggcgtcattcccgtcgactccatctacactccgattgcacgcgtgaactacggcgta
gaaaatacgcgtgtcggccaggttacgaattatgacaagctgacacttgaggtttggact
gacggaactattcgtcctgaagaagctgtgagccttggagccaaaattttgaccgagcat
gtgatgctattcgtgggtctcacggatgaagcaaaagatgcagaaattatggtcgaaaaa
gaagaagacaaaaaagaaaaagttcttgaaatgacgatcgaagagctggatctctccgtc
cgttcctataactgccttaagcgcgctggtatcaatacggtacaagaactcacgactaaa
tctgaagaagatatgatgaaggtccgtaacttgggtcgcaaatctttggaagaagtacaa
gagaagctcgaggaacttggtttaggacttcgtacggaagaatag
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