Paenibacillus polymyxa SC2: PPSC2_22745
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Entry
PPSC2_22745 CDS
T01335
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PPSC2_22745 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppm03400
]
PPSC2_22745 (uvrA)
DNA repair and recombination proteins [BR:
ppm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPSC2_22745 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PPSC2_22745 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_25
nSTAND1
AAA_21
RsgA_GTPase
AAA_22
nSTAND3
AAA_33
DnaJ_CXXCXGXG
ATPase
NACHT
AAA_24
cobW
Viral_helicase1
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
ADO58782
UniProt:
E3EAM4
LinkDB
All DBs
Position
complement(5099550..5102411)
Genome browser
AA seq
953 aa
AA seq
DB search
MANESIIIKGARAHNLKNIDVTIPRDKFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCPEHGIEITSQTVEQMVDRILQYPEKTRLQILAPLVSGRKGEHKTLFTDIAKQGFVRVR
VNGELRELSEKIELEKNKKHSIEVVVDRIVVKEDVRARLSDSIETALNLSGGQLLVDIIG
QEELRFSSNFACPICGFSIDELSPRMFSFNSPFGACPDCDGLGVKMVVDPDLLIPDPEKS
IEDGAFQAWSGGTSTYYPQFLQSVCEHYGIPQDIPVSQLTSEQMNLILHGTGDQKIRFRY
ENDFGQRKEAYVTFEGIIPNLERRYRDTASEGIREFIEGFMSAKPCNTCKGHRLKKESLS
VTIQERNIAYVTALSVGEASHFFHTLELSEKEQSIANLILKEINSRLGFLVNVGLEYLTL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISALEHMRNLGNT
LIVVEHDEDTMMAADYIIDIGPGAGIHGGMIMSQGTPQEVMEDPNSLTGQYLSGRKFIPV
NTERRKPADKWLEIRGAKENNLKNVNVKIPLGVFTAVTGVSGSGKSTLVNEILYKTLARD
LNRARVRPGQHKEIRGLEHIEKVVEIDQSPIGRTPRSNPATYTGVFDDIRDLFSQTNEAK
VRGYKKGRFSFNVKGGRCESCRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKG
KSIADVLEMTVEDATAFFENIPKIHRKIQTLMDVGLGYIKLGQPATTLSGGEAQRVKLAS
ELYRRSTGKTIYILDEPTTGLHVHDIDRLLTVLHRLVDSGETVLVIEHNLDVIKTADFLI
DLGPEGGSGGGTILATGTPEQLVKVEESYTGRYLKPILERDTQRSQALQTVDL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaatgaaagcatcatcatcaaaggcgcacgcgcgcataatctcaaaaatattgac
gtgacgattccacgggacaagttcgtcgtcctgacggggcttagcggctcaggtaaatca
tcactggctttcgatacgatctatgcagaaggacagcggcggtatgtggaatcattatct
gcgtatgcccgtcaattcctcgggcaaatggagaaaccggacgtcgattcgattgacggc
ctgtctcctgccatttccattgaccaaaaaacgacaagtcggaatcctcgttctacggtc
ggaacagttacagaaatctatgattacttgcggttgttatttgcccgagtaggtcatcct
cattgtcctgaacatggcattgaaatcacttcacagaccgtcgaacagatggtagaccgc
attttgcagtatcctgaaaagacgcggctgcaaatcctggctccattggtatccggccgc
aaaggtgagcataaaacactgttcactgatatagccaagcagggctttgtacgggtacgt
gtgaatggcgaactgcgtgaattgtccgagaagattgaactggagaagaacaagaagcac
tcgattgaagtggtcgtagaccggatcgtagtcaaggaagatgtacgtgcgcgtctgtcc
gactctattgagacggcactgaatctttcaggcggacagttgcttgtagatattataggg
caagaggagttgcgatttagctccaactttgcgtgtccgatttgcggttttagcatagat
gagctatctccacggatgttttcttttaatagtccgttcggcgcttgtccagattgtgat
gggttaggagtcaaaatggtcgttgaccctgatctgctcatacctgatccagaaaaaagt
atagaagatggggcgttccaggcatggagtggaggaacttccacttattatcctcaattt
ctacagtccgtatgcgaacactacggtattccgcaggacattcctgtaagccaattgacg
tcagaacaaatgaatcttattttgcacggaacaggtgaccagaagatccgtttccgctat
gaaaatgattttggtcaacgtaaggaagcctatgtgacctttgaaggcattatcccgaat
ttggagcgtcgttaccgtgataccgcttctgagggaatacgtgaatttattgaaggcttt
atgagtgcaaagccatgtaacacctgtaaggggcaccgactgaaaaaagaaagcctgtcg
gtaaccattcaagagcgtaatatcgcttatgtgacagctttgtctgtcggggaggcttct
cactttttccatacactggagctgagtgagaaagagcagtcgattgccaatctcatttta
aaggaaattaacagccgactgggattcctcgtgaacgttggtctggaatacctgacttta
agccgtgcagcaggtacattgtccggcggggaggcacaacgtatccgattggcgacacag
atcgggtctagtctgatgggcgtgctttatattttggacgagccaagtattgggcttcat
cagcgcgataatgaccgtctgattagtgctttggaacatatgcggaatctgggcaatacg
ctgatcgtggtggagcatgacgaagatacgatgatggcggcagactatatcattgacatt
gggccaggagccggaatccatggcgggatgatcatgtcgcaggggactccacaggaagtt
atggaagatccgaattccctgaccgggcaatatttgagcggtcgcaagtttattccggtc
aataccgagcggcgcaagcctgcggataagtggctggagattcgcggagccaaggagaac
aatctcaaaaatgtgaatgtcaaaattccattgggtgttttcacggctgtcactggcgta
tccgggtctggaaaatcgacgctggtcaacgaaattttgtacaaaacgttggcgcgtgat
ctgaaccgtgcgagagtacgcccaggtcaacataaagaaattcgagggctagagcatatc
gaaaaggttgttgagatcgatcaatcgccaatcggccgtacaccgcgttccaatcctgca
acttatacaggtgtgttcgatgatatccgtgacttattctcgcagacgaacgaggctaag
gttcgaggctacaagaaaggccggtttagctttaacgttaagggaggccgatgtgaatct
tgcagaggcgacgggatcatcaagattgagatgcattttttgcctgatgtgtacgtacca
tgcgaagtgtgcaaaggcaaacgctataatcgggagacccttgaggttaagtataaaggg
aagagtattgctgatgtgctggagatgacggtagaggatgcgacagcattttttgaaaat
atccccaagattcatcgcaagattcagacgctgatggatgtaggtttggggtatatcaag
ctggggcaaccagcgactaccttgtctggtggtgaagcacagcgtgtgaagctggcttcc
gaattgtatcgtcgcagcacaggcaaaaccatttatattttggatgagccgacaaccggt
ttgcatgttcacgatattgaccgattattgaccgtgttgcatcgtttggtcgattcaggc
gaaaccgtactggttattgagcataatctagatgtaattaaaacagctgatttcctgatt
gatctggggcccgaaggcggaagcggcggtggaacgatcttggctaccgggacaccagaa
caacttgtaaaagtagaggaatcctatacaggccgatacttaaagccgatccttgaacgg
gatacacagcgcagtcaagcgcttcagaccgtcgatctatag
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