Paenibacillus polymyxa SC2: PPSC2_23225
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Entry
PPSC2_23225 CDS
T01335
Symbol
spoIID
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
ppm
Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppm01011
]
PPSC2_23225 (spoIID)
Enzymes [BR:
ppm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PPSC2_23225 (spoIID)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PPSC2_23225 (spoIID)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
DUF4739
Motif
Other DBs
NCBI-ProteinID:
ADO58891
UniProt:
E3EBS3
LinkDB
All DBs
Position
complement(5233594..5235033)
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AA seq
479 aa
AA seq
DB search
MKDSQVRIRIPIHHPQEHRQASLAEESSGSIATSLQKNKLMQQHAESTGAFPTIAKTNRR
TTALTSTTHTVGTMLPEAGTSPGNTYDASRRRGPQPHLRPAAGRAPRWGSRRPWLPFAAM
AGALVLAMAVPALMAWPRQAAQPLPTGSRTAAPAQSNTTAKSEAPVTRLPGVPPIPAVPA
APARSVPVVAEPDVRVYVTSTGRTETLPLEQYIVGVVAAEMPPSFEEEALKAQAIAARTF
ITRRLLADDTSGAPAGADVTDTVKHQAYISKAKLTREWERSGKSADLAKIRQAVRETKDT
IMVYEGKPITASFFSTSNGYTENSEDVWAKAVPYLRSVSSPWDKQLAPRFTETVTLSRQS
VFDRLGLSRAAVTASTGGGSMPEIRILSKTEGHRIKKIEVGGLVFTGPEIRNKLGLRSAE
FTWKTEGDRIAITTYGYGHGVGMSQWGANGMAKEGHTATQILLHYYTGISFANASRILS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattcacaggttcgcatccgtataccaattcatcatcctcaggaacatcgccag
gcctcacttgcggaggaaagctctggctctatagcaacttcgttgcagaaaaataaactt
atgcagcagcatgcagaatcaacaggtgcatttccgactatcgccaagaccaatcggcgt
accacagcgttgacttccactactcacactgtcggtacgatgcttcctgaggctggaaca
tcgcccggtaacacatacgacgcaagcaggcggcggggaccgcagccgcatctgcgacct
gcagccgggcgagctccgcgttggggcagccgccgcccatggctgccatttgccgccatg
gcaggggcgctggtgcttgccatggctgtgcccgcactcatggcatggcctcgccaggcg
gcgcagcctttgccgactgggagccgcacagccgcacccgcgcagtctaatacgacggca
aagagcgaggcacccgtcacgcgcctgccgggtgtcccaccgataccggccgtacccgct
gctccagcgcgtagcgttccggtcgtggcagagccggacgtgcgggtgtacgtcacgtct
actggccggacggagacattacctttggagcaatacattgtcggcgtagtagcagctgaa
atgccgcccagctttgaggaagaggcattgaaagcacaggctatcgccgcgcgtacgttc
attacccggcgtttgttggctgatgacaccagcggcgccccggcgggcgcagatgtgaca
gataccgttaaacaccaggcttacatctccaaagctaaacttactagagaatgggagcgt
tctggtaaatccgcagatctggcaaaaattcgccaggctgtgcgcgagactaaggataca
atcatggtatatgagggtaaacccattacagcttcttttttttctaccagcaacggctat
actgaaaattcagaggatgtatgggcgaaggccgtgccctatttacgaagtgtgtctagt
ccatgggacaagcagctggccccccgttttacagaaaccgtcacactgagccgtcagagc
gtgttcgatagattgggattgagtcgtgctgcggtcactgcttctactggaggtgggagt
atgccagagattcgtatactctccaagacagaagggcatcgcatcaagaagattgaggtg
ggaggcttggtctttacggggccggagattcgtaacaaactagggctacgatcagctgaa
tttacgtggaagaccgaaggggaccggattgctataacaacctatgggtatggccatggc
gtcggtatgagccagtggggagccaatggaatggctaaggaaggtcataccgccactcag
attcttcttcactattatactggtatttcttttgcgaatgcctctcgtattctaagttag
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