Paenibacillus polymyxa SC2: PPSC2_25230
Help
Entry
PPSC2_25230 CDS
T01335
Name
(GenBank) LPS biosynthesis protein
Organism
ppm
Paenibacillus polymyxa SC2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7601
CarboxypepD_reg
DUF5979
CarbopepD_reg_2
SpaA
Motif
Other DBs
NCBI-ProteinID:
ADO59331
UniProt:
E3EB51
LinkDB
All DBs
Position
complement(5664735..5670872)
Genome browser
AA seq
2045 aa
AA seq
DB search
MKQKSSLGKTMLSFCLAVLLVLQTVVFPAAAYADDESGSQNAAESPSVSEAVYGAPDQPS
SATEAVYAPLLTFAALTANLTDKTAVLANANPTFKLTVKQGNPEAVVPAGGEINGRENFT
LELDSIAVPTKGDDLNAPPESVIQQGDYAVLDKATYFPGVNLAPTGPMPINQGGLKIATV
QFFADSIKITFDGAGVYDGSRRDVKIGFSAAARAADQTPGGGGDTTIFGDGYKFKNSDLV
PEYTITVSSLSNGGYDSGINSPSFQEGTITWRAVVTATDTDDKTIPMRLDGLTFSDELAN
VGVYVPGSFTVDGNAADPNYAADRTLFYKFPDASTVDNVKSTATITFKTWIPKNSYYYEK
NGNFADQYGWNRIDNTAKLLGDATDVKASSNTHRIAIRPNWIAASGKPGKSGNDTLITWT
VEVNKRINNNGVLSRTGLQNVKITDVLPDGTEFVSATYKNGDSGTDTPITRNAAGEYEIG
TAIGGNLDGPLYMTVVTKVTDSSKLIFDYKARANWELDVKDGGTAIQNNDATGWVAPAAV
VDTAQVRIGAHAFTKSATTTTALHNVAGTKWTINLTLQYNLDAPVVYDLLVHGDSLDVLN
NLDANPKVTSTTLEAIKSQIDTKQLWQKYRENTLTVSNGLNGEVIPLTVNGERVADLIKV
TGYKGDVPGSVSFESVTTNPDNLFRQDNAGNTWSNRGLLFDGDDYVSRAEANTSNLVRML
NKEMLYANTAGLEGVAADWNRNYSGQWSDSIWKRTPVASDPNWYMDNSRPDNYILAGYDR
KDRTVTFRLAVNMPGFNTEEMAKDGGTRVASDIKLVDVLPEGWEFVDYAPGEAYRLYKGG
TGYRTDGKGGSGRYAQAISVIAPGTPQHVVSFTKDGNEGTFTFSKLESPYVILVKARPTN
AALANYKLGNNNAGENQAMFSMKWGDKPYSATEAHRIIVPVQSLSKTVQKPVSGVQEWTV
NYTPPFEMKPGVYLLDTLAKGLKLRQNAEGGLSLEPSDIAVYPGKLKPDGTLERNGGPLN
LADPNSEVKVTIGTDPVTGGSTLRFDFVDPNKFYQIVYQTESQGMQPGTAGNSIKLMGDD
SLPPIGAQSSIMLDANDVAGSANENGLLFLKKVGPDGITPLKDVKFQLLNPDGTPARDKE
NNVMVEKTTGTDGKTNFIIQVPGDYLLKQTYIDLLTYLPTTTIYRVRVIDAPGKPVLVDG
QKVESNNPLIVPTPAEGKLTISNKVEGNGSDPDKEFEYTVTFNGEGKDGEYTYKKPDNTY
GKIKSGDKITLKHGQTVMLPILPAGLVYTVTEGDYTTVDGYTTDPETREWSGTIVNKGDH
KADFVNERIVNKLTISNTVMGNGGDKAKEFEYTVSFAGVGKDESYSYVKSDGDKGSIKSG
GTLRLKDGETLDVLDLPKNLTYTVTQKDYTTDEYMTTPGERYYTGVMKGKDEVAPFKNMR
VMTGSLLISNKVQGNGGNKTKAFKYKVTFTGEGANGSYSYEKSDGSKGTIKSGDTFELKD
EELFIVEGLPTYLQYTVTEDNYTDDGYVTDPASLIRTGTIPVKSAAEAHFVNTRQLPVLE
GVLRDNNTGEVIPNASITVTNLKTGEKQTIQTNEKGEYSVIAEAATDYTITFTKWYPVGG
KDVPVEFTQKANVDSSVTDETVPADITAVGIVLLKQPEGQTSLLDSKLAGKMHIYLRDAS
NQYVVDKNGAPKAFNLESNGVFSADGLAAKTYKMEVRYEVAPGQELTVLQADLDVKANGE
LNISQGLVDPYGIITDATTGMVIEGAEVTLYYADTPGNTASGIVPGTKVTLPAIPGFAPN
DNASPSQNSDANGAYAYMVFPNTDYYLVVTKAGYDAYTSPTISVGSDIVRHDIQLKPIIS
GGGGGGNSGGSGGGTGSGSGSSGTDNSDDGAGNVNNGASNVNNGASNVNNGASNVNNGAS
NVNNGASNVNNGTSNVNNGASNVDNGASNVNNGASNVDNRASDVNNGAGNVNNGAGNVNN
EINKGNNASGSVVDNEVANGDYELDDAPKTGDSSPSPIFYMVLALISLITIGFCLLSGKK
KKHIQ
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacaaaaaagcagtttaggtaaaactatgctatctttctgcctggcagttttgctt
gtcttgcagacagtggtattccctgctgctgcatatgcggatgacgaatccggctcgcag
aatgcggctgaatcgccttcggtatctgaggcggtgtacggcgcgccagaccaaccgtcg
tcggcaactgaggcggtgtacgctccgctgctcactttcgcggcgttgacggcaaatctg
acggacaaaacggcggtgctggcgaacgccaatccgacgttcaagcttacagtgaagcag
ggtaaccctgaagctgtggttccggcagggggcgagattaacggccgggagaactttacc
cttgagctggatagtatcgctgtgccgaccaagggcgacgatctcaatgctccgcccgaa
agtgtgattcagcagggagattatgccgtcctggataaggcaacctacttccctggtgtg
aatttggcgcctacaggtcctatgccaatcaatcagggcggactgaaaattgctaccgtc
cagttttttgccgattctatcaaaattacgtttgatggcgcaggggtatatgacggcagt
aggcgcgacgtcaaaatcggcttttccgctgctgctagagcggcagatcagacccctggc
ggtggcggggatacgaccatttttggagatggctataagtttaaaaactcggatttggtg
cccgagtataccattactgtaagctccttaagcaacggcggctatgacagtgggattaac
agcccttcttttcaagagggtaccattacgtggcgagcggtagtaactgcaactgacacg
gacgataagaccatccccatgcggctggacgggttgactttctctgatgagcttgcgaac
gtcggtgtatatgtgcctgggtccttcactgtggatggaaatgcggcagatcctaattat
gctgctgatcgcacacttttctataagttcccagacgcatccactgtagataatgtcaaa
agcacggcgactattactttcaaaacgtggattcctaagaatagttattactacgaaaag
aatggaaattttgctgatcagtatggatggaaccgcattgataataccgcaaagcttttg
ggtgacgctaccgatgtgaaggcttcatcaaatacccatcggattgctatacgccccaac
tggattgcggcgagcggcaagccgggcaagagtggaaacgatacgctcatcacgtggacg
gttgaggtcaacaaaaggattaacaataacggtgtactgtccagaaccggcttgcagaac
gttaagattacagacgtcctgcccgacgggacggagtttgtttccgcaacctataagaat
ggggacagcggtacggataccccaattacccgtaacgccgcaggggagtacgagatcgga
accgccatcggcgggaatctggacgggcccctctatatgacagttgtgacgaaggtgaca
gacagcagcaagttaatcttcgattacaaagcgcgcgcaaactgggaattggatgtgaag
gatggaggaactgccatccagaacaacgatgcaaccggctgggtcgctcctgctgccgtt
gtggacactgcacaggttagaattggcgcacatgccttcacaaaaagtgcgaccacaacc
accgcgctgcacaacgtcgcaggcaccaagtggacgataaacttgacgctgcagtacaat
ctggatgctccagtcgtctatgatttgctggttcacggcgattctctcgatgtactgaat
aatctggatgccaatcctaaggtaacgtcgacaactctagaagcaatcaagagccagatc
gacaccaagcagctttggcaaaaataccgcgagaatacgttgactgtgagcaatgggttg
aatggtgaagtgatccccttgacggtgaacggcgagcgggtggcggaccttatcaaagtt
accgggtacaaaggagatgtaccagggagcgtttcctttgagtctgtcactaccaacccg
gataacctgttccgccaggataacgctggaaacacatggagcaaccggggactgctcttc
gacggtgacgattatgtgagtcgcgccgaagccaacacctcgaaccttgtgcggatgctg
aacaaggagatgctgtatgcgaacacggcgggtttagagggggttgcagccgattggaac
cgaaactattcaggccaatggagcgacagcatatggaaaagaacgcccgtggccagcgac
ccgaattggtatatggacaactcccgtcctgacaattacatcctggcaggctatgaccgc
aaggatagaacggtcaccttccggctggcggtgaacatgccaggattcaatacggaggag
atggccaaggatggcggcacccgtgtagccagcgacatcaagctggtggatgtattgccg
gaaggctgggagtttgtagattatgctccgggcgaggcttatagactttataaaggtggt
accggctatagaaccgatggtaaaggcggaagtggtagatatgcacaggccatttcagtc
attgcgccgggtacgcctcagcatgtggtgagctttaccaaggatggcaatgaaggaacc
ttcaccttctccaagctggagagcccctacgtcattctggtgaaggcgcgtccaaccaac
gccgcgcttgccaattacaagctaggcaataataacgccggggagaatcaggctatgttc
tccatgaaatggggagacaagccgtatagtgctaccgaagctcacagaatcattgtacct
gtgcagtctctgagcaagacggtgcaaaagcctgtttctggtgtacaggaatggacggtg
aattacacacctccgttcgagatgaagccgggcgtttatttgctggatactctcgccaaa
ggtctgaagctgcgccaaaatgcggagggtggcctatccctcgaaccttccgacatcgct
gtctatcccggcaagttgaagccggatggcactttagagcgtaacggaggaccgctgaat
cttgcggatccgaatagtgaggtgaaagtcaccataggcacagacccggtaaccggggga
tcgacgcttaggtttgattttgtcgatccgaacaagttctatcagatcgtttaccagacc
gaatcccagggcatgcagccgggaacagctgggaattccatcaagctgatgggcgatgat
tcccttccgccgatcggagcgcagagcagtattatgctggacgcgaacgatgtagcggga
agtgccaatgaaaacggcctgctcttccttaaaaaagtcggtcccgacggtataacaccg
ctgaaggatgtaaagttccagttgctcaatcctgacggtacaccggctagggataaagaa
aataatgtaatggtggaaaagacgacgggcacggacggcaaaacgaatttcattattcag
gtgccaggggattatttgctcaaacagacatatattgatctcctcacttacttgcctacg
actacgatataccgggtacgtgtcatcgatgcgcccggcaagcctgtccttgttgatgga
cagaaggtggaatcgaacaatccgctgatcgttcctacaccggccgaaggcaagctgacc
atcagcaataaggtggaaggcaacggcagcgacccggacaaagagttcgagtacaccgtg
accttcaacggcgaaggcaaggacggagagtacacctataagaagccagataatacgtat
ggcaagatcaaaagcggtgacaagattaccctcaagcacggacaaactgtgatgctgccg
atattgcctgcgggtctggtttataccgtaaccgagggcgattatacgacggttgacggc
tacacgactgatccggagacgagagaatggtccggaacaattgtgaataaaggtgaccac
aaggcggactttgttaatgaacgaattgtcaacaagctgaccatcagcaatacggtcatg
ggcaacggcggcgacaaggcaaaagagttcgaatacaccgtcagctttgcgggtgtaggt
aaggatgaaagctactcttacgtgaagtcggacggcgacaaaggttcgatcaagtccggc
ggtaccctccggctcaaggatggagagacactggatgttttggacctgcctaagaatcta
acttacacagttacccagaaagactacacaaccgatgaatacatgactactcctggggag
cggtactataccggagtcatgaagggtaaggatgaagttgccccattcaagaacatgcga
gtcatgacggggagcctgctaatcagcaacaaggttcaaggtaatggtggtaacaaaacg
aaggcgttcaagtacaaggtcaccttcacaggcgagggagcaaacggctcctactcctat
gagaagtcggacggcagtaagggcaccatcaaaagcggggatacctttgagcttaaagat
gaggaactgttcattgtggaaggacttcctacgtatctccaatatacggtgaccgaagat
aattacacggacgacggctatgtgacagatcctgctagtctcattcgcacgggtaccatt
ccggtgaaaagcgcggctgaagcacactttgtgaatacccgccagcttccagttctggaa
ggcgtgctgcgtgacaacaacacaggagaagtcattccgaatgcgtccatcacagtgacc
aatctgaagacaggcgagaagcagacgattcagacgaatgagaagggtgagtattcggtc
attgccgaggcagctaccgactacacgatcacatttacgaagtggtatccggtaggcgga
aaggatgtgcctgtcgagttcacgcaaaaagcaaatgtggacagcagtgtgacggacgag
accgttccggctgatattacggcggtaggtattgtgcttctgaagcagcctgaagggcag
acttcgctgctggacagcaagctcgctggcaagatgcacatctacttgcgggatgccagc
aaccagtatgttgtggataagaatggcgctcccaaagcgttcaacctagagtcgaacggc
gtcttctcagcggacggtttagccgcgaagacttacaaaatggaagtgcgctacgaagtg
gcgccaggtcaagaattaacggtccttcaagcggatctggatgtgaaggccaacggggaa
ttgaatatttcccaggggctcgttgacccgtatggcatcattacggatgcaacaaccggc
atggtgattgaaggcgctgaagtgacgctatattatgctgatacgccaggaaacacagcg
agcggcatcgtgccgggcacgaaagtaacgctgccagcgattccgggctttgcaccgaat
gataacgccagcccaagtcagaacagtgacgcaaacggcgcatatgcatacatggtattc
ccgaacacggattactatctggttgtaaccaaagccggatatgatgcgtatacaagccca
actatctcggtcggaagcgacatcgtacgccacgatatacagttgaaaccgataatttcc
ggcggcggtggtggcggcaatagcggcggcagtggcggcggaactgggtccggcagtggc
agtagcggtaccgataacagcgacgacggagcaggcaacgtgaacaacggggcaagcaac
gtgaacaacggggcaagcaacgtgaacaacggagcaagcaacgtgaacaacggagcaagc
aacgtgaacaacggagcaagcaacgtgaacaacggaacaagcaacgtgaacaacggagca
agcaacgtcgacaacggagcaagcaacgtgaacaacggagcaagcaacgtcgacaacaga
gcaagcgacgtcaacaacggagcaggcaacgtgaacaacggagcaggcaacgtgaacaac
gaaatcaacaaaggcaacaacgcaagcggtagcgtcgtcgacaatgaagtcgccaatggc
gattacgagctggacgatgctccgaaaacaggggatagcagtccatcgccaatcttctat
atggttttggcgctgatatccttgattacgattggattctgtttactcagcggcaagaag
aaaaagcatattcagtaa
DBGET
integrated database retrieval system