Paenibacillus polymyxa SC2: PPSC2_27785
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Entry
PPSC2_27785 CDS
T01335
Name
(GenBank) hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ppm
Paenibacillus polymyxa SC2
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppm03019
]
PPSC2_27785
Messenger RNA biogenesis [BR:
ppm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PPSC2_27785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_D_N
DUF1492
Motif
Other DBs
NCBI-ProteinID:
ADO59455
UniProt:
E3EKC8
LinkDB
All DBs
Position
pSC2:341280..342239
Genome browser
AA seq
319 aa
AA seq
DB search
MKTKIKDLQKGQEAIIEGTIIKDKKFKQTNSNEPWIHLKVTDQSRSSAYAKIWNELELYP
VIEEMEDGTYIEANVKCTQSDEFIHIEIQSIQVIERKTKEMVDAEGLKAELRAAISGIKD
LKLKKLIKVVFTRPDIKETYFKAPATMMSGYSFEGGALAYVVRSIRLVKAVALVFNEWNH
NADGITAKLSEDFLTTACILEAVGRTKSLRMNGVRVEKTTEGEMFEDAYLTLKVIWEEIG
KINLSDEQRLMLEHVIGSSKGKSEWGALHIPRSREAVAFGIILNLNFQMGNFEYLERHAG
TEDTFAKLFKKQMYLGAYE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaagataaaagatctgcaaaaaggacaagaagccataattgaaggaacgatc
attaaagataaaaaatttaagcaaacgaatagcaatgaaccctggattcatctgaaagtg
acagatcaaagtcgaagttcagcatatgcgaaaatctggaacgagttagagctctatcca
gtgattgaagaaatggaagatggaacgtacattgaagcgaatgtaaaatgtacccaatct
gatgaatttattcatattgaaatccagtccattcaggttatagaaaggaaaaccaaagaa
atggtggacgcagaaggtttaaaggcagagcttcgagcggctatttcggggattaaagat
ctcaaattgaaaaaattaatcaaagtagtatttactcgccctgatatcaaagagacctat
ttcaaagcaccagcaacgatgatgagcgggtacagctttgagggcggagccttagcctac
gttgttcgttccatccgtttagtgaaagccgttgcgttagtttttaatgaatggaatcac
aatgctgatggtattacggcaaaattgagtgaagattttcttacaacggcttgtattctg
gaggctgtgggcagaaccaaatctttacgaatgaacggtgttcgagtggagaaaacaacc
gaaggtgaaatgtttgaagacgcctatctaaccctcaaagtgatttgggaggaaatcggt
aagataaatttgtcagatgagcagcgactcatgttggaacatgtcatcggttcatccaaa
ggaaaatccgaatggggagctttgcatattccacgctcaagagaagcggttgctttcggc
attatcttgaatcttaatttccagatggggaattttgaatacttggaaagacatgcgggg
acagaggacacatttgctaaattatttaaaaaacaaatgtatttaggtgcatatgaataa
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