Paenibacillus polymyxa SC2: PPSC2_27930
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Entry
PPSC2_27930 CDS
T01335
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ppm
Paenibacillus polymyxa SC2
Pathway
ppm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPSC2_27930
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppm01007
]
PPSC2_27930
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppm03016
]
PPSC2_27930
Enzymes [BR:
ppm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PPSC2_27930
Amino acid related enzymes [BR:
ppm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PPSC2_27930
Transfer RNA biogenesis [BR:
ppm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PPSC2_27930
Prokaryotic type
PPSC2_27930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF5915
tRNA-synt_1f
tRNA-synt_1b
ABC_tran_CTD
CCDC-167
YlqD
Motif
Other DBs
NCBI-ProteinID:
ADO59426
UniProt:
E3EK99
LinkDB
All DBs
Position
pSC2:371577..374243
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AA seq
888 aa
AA seq
DB search
MSEQDNKTTLEMPTTYDPKSAEQKWYKTWMEKGYFRAGQHPEAEPFTIVIPPPNVTGMLH
IGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKVEQKLREEGLTRYDLGREKF
LEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSKAVREVFVKLYQKGLIYRGK
RIINWDPAARTALSDIEVEYKEVNGNLYHLQYPLKDGSGFITVATTRPETMLGDTAVAVH
PEDERYKEMIGKTLVLPIIGREIPVIADDYVDKDFGSGAVKITPAHDPNDFEMGQRHQLP
QITVMDETGTMNAEAGKYQGLDRSDCRKQIVADLKEQGVLIRIEEHVHQVGHSERTGVVV
EPYLSTQWFVEMKPLAAKAIEAQKAGKGVNFVPDRFERTYLHWIENVRDWCISRQLWWGH
RIPAWYDQESGEVIVSAEDPTTLPEYAGRKLIQDEDVLDTWFSSALWPFSTLGWPEQTED
LKRYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEIPFKDVLMHGLVRDADGRKMSKSLGN
GVDPLDVIDQYGTDAMRYMISTSSTPGQDLRFRWERVEQARNFANKIWNASRFALMNLEG
ITASDINIEGNLSTVDRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDLCDWYIE
FAKLSLYGENAEAKKKTQSVLAYVLDRTLRMIHPFMPFISEEIWQHLPHEGETITLAAWP
VYDPAFEDKDAVAEMNLLIDVIRAVRNIRAEVNVPMSKKVELIIKPGDQAVLDIINRNGE
YVRRFCNTSEFDAGLEFTAPEKAMTSIVSGAELYLPLAGLLDITQEISRLEKELQHLNSE
VERVEKKLSNQGFVAKAPAKVIEEEKAKQADYSDKRAKVIARIEELKA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaagacaacaagacaaccttggaaatgccaacaacgtacgatcccaaatcc
gcagaacaaaaatggtacaaaacgtggatggagaagggctatttccgtgctggacaacat
ccagaggcagaaccttttacaatcgttattccaccacccaatgttacgggtatgttgcat
attggacatgctctcgactttacgttgcaggatattattatccgcgccaaacggatgcag
ggttatgatgccttgtggctgccgggcgcagaccatgcagggattgcgacccaaacaaag
gtagagcagaagctgcgtgaagaagggctgactcgctatgatttggggcgcgagaagttt
ttggagaaagtgtgggagtggaaggatctctatttggacaacatccacaatcaatgggag
aaaatgggcttctccctcgattattcccgtgaacgttttacattggatgagggactgtcc
aaagcggtacgcgaagtattcgttaaactgtaccaaaagggcctgatttatcgcggtaaa
cgcatcattaactgggaccctgctgcacgtacggcattgtcggatattgaagtggaatac
aaagaggtaaacggaaatctgtatcacctgcaatatcctttgaaagacggtagcggattt
attacagtagctacgactcgtcctgaaacgatgttgggcgatacagcagtagcagtacat
ccagaagatgaacgctacaaagagatgatcggtaaaacactcgtgcttcccatcatcggg
cgcgaaattccggttattgcagatgactatgtggataaagatttcggtagcggcgctgtt
aaaatcacaccggctcacgatccgaatgactttgaaatgggacaacgtcaccagttgcca
caaattacggtgatggacgagacgggaacgatgaatgccgaagcaggcaaatatcaggga
ctggatcgcagcgattgccgtaagcaaattgttgctgatttgaaagaacagggcgtactg
attcgcattgaagagcatgtgcaccaggtaggtcacagtgagcgtacaggggtagttgta
gaaccttatctgtccacgcaatggttcgtggaaatgaagcctctggcagctaaggcgatt
gaagcgcagaaggctggcaagggtgtaaactttgtaccagatcgctttgagcgcacgtat
ctgcattggattgaaaatgtacgagattggtgtatttcccgtcaattatggtggggacac
cgcattccagcttggtatgatcaagaaagcggagaagtgattgtatcagcggaagaccct
accactttgccggaatatgctggcagaaagctcattcaggatgaagatgtgctcgatact
tggttcagctctgctttatggccgttttcgactctcggttggcctgagcagacggaggat
ctcaagcgctactatccgacgaatgttctggtgacgggctacgacattatttatttctgg
gtttcgcgtatgatctttaccgcactggagtttacggaagagattccattcaaggacgta
cttatgcacggtttggttcgtgatgcagacggaagaaaaatgtccaaatctctgggcaat
ggtgttgatccgctcgatgtcattgaccaatatggtactgatgccatgcgttatatgatc
tccaccagcagcacgcctggacaagaccttcgtttccgctgggagcgtgtggagcaggcg
cgtaactttgccaataaaatctggaatgcatcacggtttgcgttgatgaatctggaaggg
atcaccgcatcagatataaacattgaggggaacttgagcaccgtggatcgctggattctg
catcgtctaaacgaaacatcacgcgatattacacgtcttatcgatgcttatgaatttggc
gagacaggtcgtcttctgtataactttatttgggatgatttgtgtgactggtacattgag
tttgcgaagctttccctatatggcgaaaatgcagaggcgaaaaagaaaacacaatccgta
cttgcctatgtattggatcggacactgcgcatgattcatccgttcatgccgtttatctcc
gaagaaatatggcagcatcttccgcatgagggagaaacgattacgctggctgcttggcct
gtctatgatcctgctttcgaggataaagatgcggtcgctgaaatgaacctgctgatcgac
gtgattcgcgctgtacgtaacatccgcgctgaagtcaacgtgccgatgagtaaaaaagtt
gaattgatcataaaacccggcgatcaagccgttcttgatatcattaaccgcaatggggag
tatgtacgtcgattctgtaatacgtctgaattcgacgcgggattagagttcactgctcca
gaaaaagccatgacatcgattgttagcggcgcagagttatacttgccgttagctggactg
ctggatatcactcaggaaattagcagactggaaaaagaacttcagcatttgaacagtgaa
gtggagcgcgtggagaaaaagctttccaaccaaggcttcgtagcgaaggcacctgccaaa
gttatcgaggaagagaaagcgaagcaagctgattactctgataagcgtgctaaagttatc
gcacgtattgaagaactcaaagcataa
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