Paludibacter propionicigenes: Palpr_0827
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Entry
Palpr_0827 CDS
T01362
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn00061
Fatty acid biosynthesis
ppn01100
Metabolic pathways
ppn01212
Fatty acid metabolism
ppn02024
Quorum sensing
ppn04146
Peroxisome
Module
ppn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Palpr_0827
00071 Fatty acid degradation
Palpr_0827
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Palpr_0827
09145 Cellular community - prokaryotes
02024 Quorum sensing
Palpr_0827
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppn01004
]
Palpr_0827
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppn04147
]
Palpr_0827
Enzymes [BR:
ppn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Palpr_0827
Lipid biosynthesis proteins [BR:
ppn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Palpr_0827
Exosome [BR:
ppn04147
]
Exosomal proteins
Exosomal proteins of breast milk
Palpr_0827
Exosomal proteins of breast cancer cells
Palpr_0827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Histone_HNS_N
Topoisom_I_N
Gta3
Motif
Other DBs
NCBI-ProteinID:
ADQ78981
UniProt:
E4T2N7
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All DBs
Position
complement(987144..988958)
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AA seq
604 aa
AA seq
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MNKKIEPKPLTLQSLIDYSVKNFSTQLSVSFVDGKPITYKELGRQIEELSKLLYSFGLRK
GDKVALLSHNMPNWVVAYFAVVSKGLVIVPVLPDFTRVEIENVLLHSESKALFISERLLT
RIEGLELPLLEATILLDNFSILNGSSDTEAKAVDCSKIIVEEEDTAAIIYTSGTTGRSKG
VVLSHKSITFIAMQSDAFQSISKADVFLSLLPLSHTYENSIGMLFPIMYGASIYYLEKPP
TAAALLPALAKIRPTMMLSVPLIMEKLYKTQIQSKFASNQFKRMIYKTPLFRKIIHRIAG
KKLYQTFGGRLKFFGIGGAKLDSRVERFMKEGKFPYAIGYGLTETAPLLAGAGVQQTKLQ
STGFAVPGVQLKINNPDKKGVGEIWAKGPNVMKGYYKNPEATAEVLTADGWFKTGDYGRF
DSRKRLYIKGRIKNTIVGASGENIYPEDIETIINNHKLVVESLVLEEDGFLVAKVLLDIE
ELEKVIGHFKSVIEDKKEKHKAWKANFMKELNEKLNRVSQINRIDIMDEPFEKTASQKIK
RFLYSKQHKSEHKKKSEMIRSFFMPSWLCLCFVYPLSLSKTVAYRMFSFLCQVLFPVWLI
LCRL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaatagagcccaagcctcttacgcttcagtctttgattgattattctgta
aagaatttttctacccaactttcggtttcattcgttgatggtaaacctatcacctacaaa
gagcttggtcggcaaatagaggaactctctaaactgttgtactctttcggtttacgaaaa
ggagataaagtagccttgttaagccacaatatgcccaactgggtggttgcttacttcgct
gtagtttccaaggggctggttatagtccctgttttgcccgattttacccgtgtagagata
gaaaacgtattgctacattccgaatcgaaagcattgtttatcagtgaaagattgcttacg
cgaatagaagggctggaattgccattgctggaagctacaattctgcttgataatttttcg
atacttaacggatcttctgacactgaagctaaagcagttgattgctccaaaatcatcgtc
gaagaggaagatactgctgccataatttacacctcgggcactaccggaagatcaaagggt
gttgtgctttctcacaagagcataacattcatagccatgcaatcggatgcatttcagtcc
atatccaaagccgatgtgtttctgtcattgcttcccctgtcgcatacgtatgaaaattcc
atcgggatgctgttccccattatgtatggtgcatccatttattatcttgaaaaacctccc
actgctgctgcattactaccggctttagctaaaataaggcctactatgatgctctccgta
cctttaattatggagaaactctataaaacccaaattcaaagtaagttcgccagcaaccaa
tttaagcggatgatttataaaacgccgcttttccgtaaaatcatccatcgtattgccggt
aaaaaactgtatcaaacttttggaggcaggctaaagttctttggcattggaggagctaaa
ctcgattcgcgtgtggagcgctttatgaaagaaggtaaatttccctatgctattggttat
ggtttaaccgaaactgctcctttgctggcgggcgctggagttcaacaaacaaaattacag
tcaaccggttttgctgttccgggcgttcagctaaagataaataatcctgacaaaaaaggg
gtaggagagatctgggcaaaaggacccaatgtgatgaaaggttactataaaaaccccgaa
gcgacagcagaagtgcttaccgcagacggttggtttaaaaccggagattacggacggttc
gattcgcgtaaaaggctctacataaagggtagaattaaaaatacgatagtcggtgcaagc
ggtgagaatatttatccggaagatatcgaaacgattatcaacaatcataagttggttgta
gaatcgcttgtattggaagaagatggatttctggtagccaaggtattgctggatatcgaa
gaacttgaaaaagttatcggtcactttaaatccgttatcgaagacaagaaggagaaacac
aaggcatggaaagccaattttatgaaagagctgaacgagaagctgaaccgtgtatctcag
attaatcgtatcgacatcatggatgagcctttcgaaaaaacagcttctcagaagattaag
cggtttttgtattcaaaacagcataaatcggaacataaaaaaaagagcgaaatgattcgc
tctttttttatgccctcatggctctgtctatgcttcgtttatcctctttctctttcaaag
actgtcgcttatcgtatgttttctttcctttgccaagtcctatttccagtttggctaatc
ctttgtcgtttataa
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