Paludibacter propionicigenes: Palpr_0998
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Entry
Palpr_0998 CDS
T01362
Name
(GenBank) Holliday junction DNA helicase subunit RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Palpr_0998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppn03400
]
Palpr_0998
DNA repair and recombination proteins [BR:
ppn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Palpr_0998
RecFOR pathway proteins
Palpr_0998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
Ribosomal_S13
HHH_2
RecR_HhH
HHH_3
UBA_2
Baculo_Ac102
Motif
Other DBs
NCBI-ProteinID:
ADQ79148
UniProt:
E4T354
LinkDB
All DBs
Position
complement(1201982..1202572)
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AA seq
196 aa
AA seq
DB search
MIDYIKGEISELTPAYVVLETAGIGYFIHITLPTFSFLGEHTSAKLYVYESIREDAHVLY
GFRLQSERQLFLLLISVSGIGANTARMIMSSYSAQEIQDMIASGNVSALNAIKGIGTKTA
QRIIVDLKDKIMKSAGGSEIISLVPNVQNEKKEEAVSALVMLGFAASASQKVVDKIVQEQ
PALKVEQLIKLALKMM
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgatagactatataaaaggtgaaatatcagagcttactccggcttatgttgtactggaa
acagctggaatcggctattttattcatatcactttacctactttttcgtttttgggagag
catacttcggctaagctatatgtttatgagtcaataagagaagatgcacatgttctttac
ggatttcgcctacaaagtgaacgtcagctgtttttattgctgatttcagtttcgggtatc
ggtgccaataccgcccgaatgattatgtcatcctattcggctcaggagattcaggatatg
attgcttccggcaatgtttctgctttaaatgcaataaaaggaatcggaacgaagacggcg
cagagaattattgtggatttaaaagacaaaataatgaaaagtgcgggtggaagtgagatc
atcagcttagttccgaatgtacagaatgagaaaaaagaggaggctgtttcggctttggtt
atgttaggtttcgcggcatctgcttcgcaaaaagtagttgataaaattgttcaggaacaa
ccggcgctcaaagtggaacaactcattaaactggcgttgaaaatgatgtag
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