Paludibacter propionicigenes: Palpr_1045
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Entry
Palpr_1045 CDS
T01362
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Palpr_1045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppn03021
]
Palpr_1045
Transcription machinery [BR:
ppn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Palpr_1045
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
KORA
Motif
Other DBs
NCBI-ProteinID:
ADQ79194
UniProt:
E4T3A0
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All DBs
Position
complement(1266691..1267554)
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AA seq
287 aa
AA seq
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MRQLKITKSITNRESASLDKYLQEIGREDLITVEEEVELAQRIRAGDRIALEKLTRANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAEKFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNQVGSLNKINKAFSKFEQENERKPSPEELADVLDIPVDKIADTMKVSGRHI
SVDAPFVEGEDNSLLDVMINDDSPNADRVLINESLSKEIERVLAFTLSDRERDIVKKFFG
IGVAEMTLEEIGDEFGLTRERVRQIKEKAIRKLRPNAKSKLLKGFLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaattaccaaatcaatcacgaatcgtgaaagtgcatctcttgacaaa
tacctccaagagataggacgcgaagatcttattactgttgaagaagaagttgagttggct
caacgaatccgcgcaggtgatagaatagcgttggaaaaactgacacgtgctaacttacgt
tttgttgtttcagtagcaaaacagtaccaaaatcaaggcctcagtctaccggacttaatc
aatgaaggcaatcttggactgattaaagctgccgaaaaattcgatgaaacacgtggattc
aagtttatttcgtatgcagtttggtggattcgtcagtctatcttacaagctttggctgag
cagtcacgtattgttcgtttaccgcttaatcaggtaggatcattaaacaaaatcaacaaa
gctttttccaaatttgagcaggaaaacgagcgtaaaccttcacccgaagaattggcagat
gtactggatattccggtagataaaattgccgacacgatgaaagtttcaggtcgtcatatt
tctgtggatgcaccgtttgtggaaggcgaggacaacagcttgttggatgtaatgattaac
gatgactctccgaatgcagaccgtgtgttgattaacgaatcactttctaaagaaatagag
cgcgtactggcatttactttgtcggacagagaacgcgatatagtgaaaaaattctttgga
attggtgtggcggaaatgacactggaagaaataggcgacgaatttggtttgacacgtgaa
cgcgtgcgacaaatcaaagaaaaagcgattcggaaattgagacccaatgctaaaagtaaa
ttattaaaaggatttttaggttaa
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