Paludibacter propionicigenes: Palpr_1049
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Entry
Palpr_1049 CDS
T01362
Name
(GenBank) Smr protein/MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Palpr_1049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppn03400
]
Palpr_1049
DNA repair and recombination proteins [BR:
ppn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Palpr_1049
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_22
DivIVA
ATP-synt_B
Motif
Other DBs
NCBI-ProteinID:
ADQ79198
UniProt:
E4T3A4
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Position
complement(1272044..1274500)
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AA seq
818 aa
AA seq
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MLYPDHFEQKIAFTTIRQLLKDKCVSTLGEEKVDEIQFSSDYADVMRLLSQTDEMLRVLT
TNADELPIGDFYDVRPALSRIRVEGLFLDELEVFDLRRALEAVRLLVAFLTKHEAEVYPH
LHELVSEVETFPLIVNRIDAILNKFGKIKDNASPELARIRKDIFQVQSGISRTLNSILRQ
AQADGYVEKDVAPTMREGRLVIPVSPAFKRKVNGIVHDESATGKTVFIEPQQVVEANNRV
RELEGEERREVMRILVDFTNFVRPYTESIFSSQYFLGQIDFLRAKALFGLDIKAIKPRVD
DCCQLEWAKAIHPLLFLSLKKQGKEIVPLDITLNEKQRILLISGPNAGGKSVCLKTVVLL
QYMLQCGLLVPLHDSSRAGIYERLFIDIGDEQSIENDLSTYSSHLLNMKFFIKNSNPKTL
LLIDEFGTGTEPMIGGAIAEATLERFNQNLAFGVITTHYTNLKHYAEDAEGIVNGAMLYD
RQHLQPLFQLSIGNPGSSFAVEIARKIGLPEDLIAEAAEKVGAEHLDYDKHLQDIVRDKR
YWENKRQQIRQKEKRLEETLAKYEEEMAGIDKQRKEITNKAKDEAKNLLNEANAKIENTI
RQIKEAEAEKVRTQAVRKELDDFKKKIGNEPETGRDRSRPVQIPKPIHKDRSRPVPTSNA
EHETLKIGSNVRMKGQTATGTIIEMQDKQALVAFGNLKSTVKLNQLEAISNNQLKKEARK
YESLGSTATDEVRQRKLTFQSEIDVRGMRGDEALQAVMYFIDDAVMVGVASVRILHGTGT
GALRQMIRQYLGTTHGIRTYRDEHIQFGGAGVTVVEFE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgctttatccagatcatttcgaacaaaaaatagcttttaccaccattcgccaattgttg
aaagacaaatgcgtgagtaccttgggtgaagagaaagtagatgaaatccaattttcgtcg
gactatgccgatgtgatgcgcttgcttagtcagaccgacgagatgctgcgtgtgctcact
accaatgccgacgaactgcctatcggtgacttttacgatgtgcgtccggctttgtcgcgc
atcagggtggaggggctgtttcttgatgagctggaggtctttgatcttcggcgtgcattg
gaagctgtccgcttgttggttgcttttctgaccaagcacgaagcggaagtgtatccgcat
ttgcatgagttggtgagtgaagttgaaacttttcctttgattgtcaataggattgatgcc
atcctgaataaattcggaaagataaaggacaatgcttcgcccgagctagcccgtatacga
aaagatatttttcaggtgcaaagtggcatttcacgtacgcttaattccattctgcgtcag
gcgcaggccgatggatatgtggaaaaagatgtggcacctaccatgcgcgagggtcggttg
gtgattcccgtttcgccggcttttaagcgcaaggtaaacggtattgtgcacgatgaatcg
gccaccggaaaaacggttttcatagaacctcagcaagtagtagaggccaacaatcgcgtc
agggaactggaaggggaggagcgtcgggaggtaatgcgcattctggtagactttaccaac
tttgttcgtccgtataccgaatctattttctcttcacaatattttctgggtcagattgat
tttctgcgtgccaaggctctttttggtttagatatcaaggctattaaaccacgggtcgac
gattgttgtcagttggaatgggcgaaagccattcatcctttattgttcctttcgctcaaa
aaacaaggaaaagaaattgtaccgctggatattacgctgaatgagaaacaacgcattctg
cttatctcgggtccgaacgccggcggtaaatcggtgtgcctgaaaacagtggtgctgctg
caatacatgcttcagtgcggattgctggtgccgttgcacgatagtagtcgagccggtatt
tacgaacggctgtttattgatattggcgacgaacaatctatcgaaaatgatctttctact
tacagttcacatttgctgaacatgaagttttttatcaaaaacagcaatcctaaaaccttg
ctgttgattgatgaatttggaacgggaacagagcctatgattggtggagccattgccgaa
gccacgctggaacgattcaaccaaaacctggcttttggggtgataaccacgcactatacc
aacctgaaacattacgccgaagatgccgaaggtattgtaaacggagctatgctctacgac
cgtcagcacctacaaccgcttttccaactgagcattggtaatccggggagctcatttgcc
gtagagattgcccgtaagatcggtttgcccgaagacctgattgccgaagctgccgagaaa
gtgggagcggagcacctggattacgacaagcatttgcaggatattgttcgcgacaaacgc
tattgggaaaacaaacgccagcaaattcgtcagaaagagaagcggttggaagagacactg
gctaagtacgaagaagagatggccggcattgataagcagcgtaaggaaattacgaacaaa
gcgaaagatgaagccaaaaatctgttgaatgaagccaatgcgaagattgaaaacaccata
cggcagataaaagaagccgaagccgaaaaggttcgaacacaagcggtgcgaaaggagttg
gatgattttaaaaagaaaattggaaacgaaccggaaacgggtagggacaggtcgcgacct
gtccaaattccaaaaccaattcataaggacaggtcacgacctgtccctacctcaaatgct
gaacacgaaaccctcaaaataggttccaacgttcgtatgaaaggacaaacggctaccgga
actattattgaaatgcaggacaagcaggcattggtggcttttggtaatctgaagtcgaca
gtgaagctgaaccagctggaagctatcagcaataatcagttaaagaaggaagcacgtaaa
tacgaatcgttgggcagcacggctaccgacgaagttcgtcagcgcaaactcacgtttcag
tcggaaatagatgtgcgcggtatgcgtggcgacgaagcgttgcaggctgtgatgtatttt
atcgacgatgccgtgatggtaggtgtggcatcggttcgtattttgcacggaacgggtacc
ggagcgttacgccagatgattcgtcagtatcttggaaccacccacggcattcggacctat
cgcgacgaacatatccagtttggtggtgccggtgttacggtggtggagtttgagtga
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