Paludibacter propionicigenes: Palpr_1170
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Entry
Palpr_1170 CDS
T01362
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppn
Paludibacter propionicigenes
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppn03032
]
Palpr_1170
03036 Chromosome and associated proteins [BR:
ppn03036
]
Palpr_1170
03400 DNA repair and recombination proteins [BR:
ppn03400
]
Palpr_1170
DNA replication proteins [BR:
ppn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Palpr_1170
Chromosome and associated proteins [BR:
ppn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Palpr_1170
DNA repair and recombination proteins [BR:
ppn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Palpr_1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ADQ79317
UniProt:
E4T3M3
LinkDB
All DBs
Position
complement(1418706..1418996)
Genome browser
AA seq
96 aa
AA seq
DB search
MNHKELIASMAAKLNAPKSVVADLLDTTVTTCTELLVENKTIGFQSFGNFEIRKKEERLS
VHPSTQVRTLIPPKLVVNFKQSNILKEKLKDLPHHD
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacaaagaactgatagccagtatggctgctaaactaaatgcaccaaagtcggtt
gttgctgacttgttggatacaacagttacaacttgtactgaattattggttgaaaacaaa
acaattgggtttcaaagttttggtaattttgagattcgtaaaaaagaagaacgtctgtct
gttcatccctccacccaggttcgtacgcttatccccccaaaattggtggtgaactttaag
cagagtaatattttgaaagaaaaacttaaagacttgccacatcatgattaa
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